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Protein
Submitted name:

BioF protein

Gene

bioF

Organism
Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AcyltransferaseImported, Transferase

Enzyme and pathway databases

BioCyciFTUL177416:GNBP-954-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
BioF proteinImported (EC:2.3.1.47Imported)
Gene namesi
Name:bioFImported
Ordered Locus Names:FTT_0936cImported
OrganismiFrancisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)Imported
Taxonomic identifieri177416 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella
ProteomesiUP000001174 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi177416.FTT_0936c.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4IW7X-ray2.25A1-375[»]
ProteinModelPortaliQ5NGB3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000221021.
KOiK00652.
OMAiKRYKHQQ.
OrthoDBiEOG6Q8HZD.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5NGB3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNLQDKYTQ YQRDNLLREL TPFIKDDSII DFTTSDYLNL SSAHNLKHAI
60 70 80 90 100
VNGFDKYGFG SKGSNIVCGY TDETQQFEHE FAKFINYPRA IFFSSGFMAN
110 120 130 140 150
LAIYSTLFSK HDSIFADKYI HASIIDGIKL SQAKLRRYKH QQLSQLQDIY
160 170 180 190 200
DGKSFITTEG VFSTSGSITQ LDKLAKITPE KLIVDEAHSF GVLGKNGRGA
210 220 230 240 250
INSFRISYKN CLICVFPLGK AFGGVGAVVC TTEAIAEYLI QFARNYIYTT
260 270 280 290 300
ALPPMILKAA LIQLKNLENA NDNRARLQQN ITFFNELCDA KDLELVSKDL
310 320 330 340 350
SPIRSIQLNN ANLAIRLKDK LFENKIIVSC FRYPTVPKDQ AILRFSLHSN
360 370
NTFDQIQQAL EIISKEVKYE YIRSN
Length:375
Mass (Da):42,568
Last modified:February 1, 2005 - v1
Checksum:i886A7F5240C118B5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ749949 Genomic DNA. Translation: CAG45569.1.
RefSeqiWP_003020974.1. NC_006570.2.
YP_169929.1. NC_006570.2.

Genome annotation databases

EnsemblBacteriaiCAG45569; CAG45569; FTT_0936c.
GeneIDi3190975.
KEGGiftu:FTT_0936c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ749949 Genomic DNA. Translation: CAG45569.1.
RefSeqiWP_003020974.1. NC_006570.2.
YP_169929.1. NC_006570.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4IW7X-ray2.25A1-375[»]
ProteinModelPortaliQ5NGB3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi177416.FTT_0936c.

Protocols and materials databases

DNASUi3190975.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG45569; CAG45569; FTT_0936c.
GeneIDi3190975.
KEGGiftu:FTT_0936c.

Phylogenomic databases

HOGENOMiHOG000221021.
KOiK00652.
OMAiKRYKHQQ.
OrthoDBiEOG6Q8HZD.

Enzyme and pathway databases

BioCyciFTUL177416:GNBP-954-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SCHU S4 / Schu 4Imported.
  2. "Crystal structure of 8-amino-7-oxononanoate synthase (bioF) from Francisella tularensis."
    Newcomb W., Niedzialkowska E., Porebski P.J., Grimshaw S., Anderson W.F., Minor W.
    Submitted (JAN-2013) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.25 ANGSTROMS).

Entry informationi

Entry nameiQ5NGB3_FRATT
AccessioniPrimary (citable) accession number: Q5NGB3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: May 27, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.