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Q5NCJ1 (Q5NCJ1_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Protein Rapgef6 Ensembl ENSMUSP00000098766
Gene names
Name:Rapgef6 Ensembl ENSMUSP00000098766 MGI 2384761
OrganismMus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000098766
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length1609 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 N-terminal Ras-GEF domain. SAAS SAAS000651

Contains 1 Ras-GEF domain. SAAS SAAS000651

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000098766

Sequences

Sequence LengthMass (Da)Tools
Q5NCJ1 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 0B2B677E0442B72C

FASTA1,609180,240
        10         20         30         40         50         60 
MNSPVDPGAR QALRKKPPER TPEDLNIIYS YLHGMEILSN LREHQLRLMS TRARYERYSG 

        70         80         90        100        110        120 
NQMLFCSETI ARCWYILLSG SVLVKDSMVL PPCSFGKQFG GKRGCDCLVL EPSEMIVVEN 

       130        140        150        160        170        180 
SKDNEDSILQ REIPARQSRR RFRKINYKGE RQTIIDGVDI NNYLSLPADL TKMHLTDNPH 

       190        200        210        220        230        240 
PQVTHVSSSQ SGCSIASDSG SSSLSDIYQA TESEVGDVDL TRLPEGPVDS EDEEEEEEEI 

       250        260        270        280        290        300 
DRTDPLQGRD LVRECLEKEP ADKTDDDVEQ LLEFMHQLPA FANMTMSVRR ELCSVMVFEV 

       310        320        330        340        350        360 
VEQAGAVILE DGQELDSWYV ILNGTVEISH PDGKIENLFM GNSFGIVPTL DKQHMHGAVR 

       370        380        390        400        410        420 
TKVDDCQFVC IAQQDYWRIL NHVEKNTHKV EEEGEIVMVH EHRELDRSGT RKGHIVIKAT 

       430        440        450        460        470        480 
PERLIMHLIE EHSIVDPTYI EDFLLTYRTF LETPLDVGIK LLEWFKIDNL RDKVTRIVLL 

       490        500        510        520        530        540 
WVNNHFNDFE GDPAMTQFLE EFERNLEDTK MNGHLRLLNI ACAAKAKWRQ VVLQKASRES 

       550        560        570        580        590        600 
PLHFCLTGGS EKGFGVFVEE VESGSKAADA GLKRGDQVME VNGQNFENIT LAKALEILRN 

       610        620        630        640        650        660 
NTHLALTVKT NIFVFKELLS RTEQEKSGVP HIPKIAEKKS NRHSIQDVPG DMEQAPQEKG 

       670        680        690        700        710        720 
NKKIKANTVS GGRNKIRKIL DKTRFSILPP KLFSDGGLSQ SQDDSIVGTR HCRHSLAIMP 

       730        740        750        760        770        780 
IPGTLSSSSP DLLQPTTSML DFSNPSDIPD QVIRVFKADQ QSCYIIISKD TTAKEVVCQA 

       790        800        810        820        830        840 
VQEFGLTGAS DTYSLCEVSV TPEGVIKQRR LPDQFSKLAD RIQLNGRYYL KNNMETETLC 

       850        860        870        880        890        900 
SDEDAQELLK ESQLSMLQLS TIEVATQLSM RDFDLFRNIE PTEYIDDLFK LDSKTGNTHL 

       910        920        930        940        950        960 
KQFEDIVNQE TFWVASEILS ESNQLKRMKI IKHFIKIALH CRECKNFNSM FAIISGLNLA 

       970        980        990       1000       1010       1020 
PVARLRGTWE KLPSKYEKHL QDLQDLFDPS RNMAKYRNIL SSQSMQPPII PLFPVVKKDM 

      1030       1040       1050       1060       1070       1080 
TFLHEGNDSK VDGLVNFEKL RMIAKEIRHI IRMTSANMDP AMMFRQRKKR WRSLGSLSQG 

      1090       1100       1110       1120       1130       1140 
STNSNMLDVQ GGAHKKRARR SSLLNAKKLY EDAQMARKVK QYLSSLDIDT DEEKFQMMSL 

      1150       1160       1170       1180       1190       1200 
QWEPAYGTLT KNLTEKRSAK SSEMSPVPLR SVGQTAKVHL HQPHRVSQVL QVPAVNLHPI 

      1210       1220       1230       1240       1250       1260 
RKKGQAKDHV LSTSLPQKGL GPTEEVSVKK HTEDTISVAS SLHSSPPASP QNSPRKGYTL 

      1270       1280       1290       1300       1310       1320 
TPSSKCDNLS DSSHSEISSR SSIVSNGSVD SMSAAGQDER CSSHSLAVPE PTGALEKTDH 

      1330       1340       1350       1360       1370       1380 
PSGISDHSQL AHGWMLSKPC LIKGVAVSSS LSSEEMSHEH VVLEAADSGR GSWTSCSSSS 

      1390       1400       1410       1420       1430       1440 
HDNFQSLQNQ KSWDFLNSYR HMHLDDPIAE VEPTDCEPCA CPKGCSRTCG QCKGSLETNQ 

      1450       1460       1470       1480       1490       1500 
LRQSWASSSS LSDTCEPNYG TVKRRVLESA PAEAPDGLEP RDTTDPVYKT VTSSTDKGLI 

      1510       1520       1530       1540       1550       1560 
VYCVTSPKKG DRYREPPPTP PGYLGISLAD LKEGPHPHLK PPDYSVAVQR SKMMLNSLSR 

      1570       1580       1590       1600 
LPPAPPSSHT SAWVPSKIGS QPQRHSHPKL ADVADADSEA DENEQVSAV

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AL596127 Genomic DNA. No translation available.
AL607091 Genomic DNA. No translation available.
IPIIPI00551348.
UniGeneMm.254404.

3D structure databases

ProteinModelPortalQ5NCJ1.
SMRQ5NCJ1. Positions 268-386.
ModBaseSearch...

Proteomic databases

PRIDEQ5NCJ1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000101206; ENSMUSP00000098766; ENSMUSG00000037533.
UCSCuc007iyc.1. mouse.

Organism-specific databases

MGIMGI:2384761. Rapgef6.

Phylogenomic databases

GeneTreeENSGT00560000076949.
HOGENOMHOG000247009.
HOVERGENHBG056658.
InParanoidQ5NCJ1.

Gene expression databases

ArrayExpressQ5NCJ1.

Family and domain databases

Gene3D1.10.840.10. 1 hit.
2.60.120.10. 2 hits.
InterProIPR018490. cNMP-bd-like.
IPR000595. cNMP-bd_dom.
IPR001478. PDZ.
IPR000159. Ras-assoc.
IPR000651. Ras-like_Gua-exchang_fac_N.
IPR008937. Ras_GEF.
IPR023578. Ras_GEF_dom.
IPR001895. RasGRF_CDC25.
IPR014710. RmlC-like_jellyroll.
[Graphical view]
PANTHERPTHR23113. PTHR23113. 1 hit.
PfamPF00027. cNMP_binding. 1 hit.
PF00595. PDZ. 1 hit.
PF00788. RA. 1 hit.
PF00617. RasGEF. 1 hit.
PF00618. RasGEF_N. 1 hit.
[Graphical view]
SMARTSM00100. cNMP. 1 hit.
SM00228. PDZ. 1 hit.
SM00314. RA. 1 hit.
SM00147. RasGEF. 1 hit.
SM00229. RasGEFN. 1 hit.
[Graphical view]
SUPFAMSSF51206. cNMP_binding. 2 hits.
SSF50156. PDZ. 1 hit.
SSF48366. Ras_GEF. 1 hit.
PROSITEPS50042. CNMP_BINDING_3. 2 hits.
PS50106. PDZ. 1 hit.
PS50200. RA. 1 hit.
PS50009. RASGEF_CAT. 1 hit.
PS50212. RASGEF_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSRAPGEF6. mouse.
SOURCESearch...

Entry information

Entry nameQ5NCJ1_MOUSE
AccessionPrimary (citable) accession number: Q5NCJ1
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: April 3, 2013
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info