Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

F-box only protein 39

Gene

Fbxo39

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.By similarity

Keywords - Biological processi

Ubl conjugation pathway

Names & Taxonomyi

Protein namesi
Recommended name:
F-box only protein 39
Gene namesi
Name:Fbxo39
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 11

Organism-specific databases

MGIiMGI:3505735. Fbxo39.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 443443F-box only protein 39PRO_0000119936Add
BLAST

Proteomic databases

PaxDbiQ5NBU5.
PRIDEiQ5NBU5.

PTM databases

PhosphoSiteiQ5NBU5.

Expressioni

Gene expression databases

BgeeiQ5NBU5.
CleanExiMM_FBXO39.

Interactioni

Subunit structurei

Directly interacts with SKP1 and CUL1.By similarity

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000104144.

Structurei

3D structure databases

ProteinModelPortaliQ5NBU5.
SMRiQ5NBU5. Positions 136-261.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini13 – 5947F-boxPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 F-box domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410IT1X. Eukaryota.
ENOG4111FS0. LUCA.
GeneTreeiENSGT00510000048837.
HOGENOMiHOG000112546.
HOVERGENiHBG051580.
InParanoidiQ5NBU5.
KOiK10314.
OMAiEGQCALR.
OrthoDBiEOG77M8P0.
PhylomeDBiQ5NBU5.
TreeFamiTF321665.

Family and domain databases

Gene3Di3.80.10.10. 1 hit.
InterProiIPR001810. F-box_dom.
IPR032675. L_dom-like.
[Graphical view]
PfamiPF12937. F-box-like. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5NBU5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDEDCEVTQL QEQSCWATLP DVCLRRVFWW LGDRDRSRAA LVCRKWNQIM
60 70 80 90 100
YSADLWRYRT ITFSGRPSRV HASEFESALW YIKKFGRYLE HLEIKFLNPY
110 120 130 140 150
NAVLTKKFQV TMRGLLSCLG KSNNRLRSLS IQHLELDRLV WRNSIRGSLI
160 170 180 190 200
KSLSFFLKKM GKHLDHLSLK GARLTVEQGC HILNSLSYMQ NENMASELNI
210 220 230 240 250
EDFFSHHLAV YGSSQFNKAM ATFRNLTFLT LNYNCISDEL LETLSENNAG
260 270 280 290 300
TLRTMNIKCH VHDPHGQVVW GMSWAKLARQ ASNLKVNFFF ERVMKYERLA
310 320 330 340 350
RILLQEIPVR SISLRSCYFS DPDWSMRPTL TDLLPTFRNT LQKLTFEFNN
360 370 380 390 400
NHESLDEQLH LLILACRKLF YFKIWAFLDV KFVERILKSQ EEGQCSLHTL
410 420 430 440
KVRIYTNRYE TNEEDRTLRE IYRKYRKLID SELNYFVVAY PMM
Length:443
Mass (Da):52,554
Last modified:March 15, 2005 - v2
Checksum:i4F7D3B5F8B579213
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL929071 Genomic DNA. Translation: CAI36035.2.
CCDSiCCDS36214.1.
RefSeqiNP_001093158.1. NM_001099688.2.
UniGeneiMm.390365.

Genome annotation databases

EnsembliENSMUST00000108504; ENSMUSP00000104144; ENSMUSG00000070388.
GeneIDi628100.
KEGGimmu:628100.
UCSCiuc007jys.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL929071 Genomic DNA. Translation: CAI36035.2.
CCDSiCCDS36214.1.
RefSeqiNP_001093158.1. NM_001099688.2.
UniGeneiMm.390365.

3D structure databases

ProteinModelPortaliQ5NBU5.
SMRiQ5NBU5. Positions 136-261.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000104144.

PTM databases

PhosphoSiteiQ5NBU5.

Proteomic databases

PaxDbiQ5NBU5.
PRIDEiQ5NBU5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000108504; ENSMUSP00000104144; ENSMUSG00000070388.
GeneIDi628100.
KEGGimmu:628100.
UCSCiuc007jys.2. mouse.

Organism-specific databases

CTDi162517.
MGIiMGI:3505735. Fbxo39.

Phylogenomic databases

eggNOGiENOG410IT1X. Eukaryota.
ENOG4111FS0. LUCA.
GeneTreeiENSGT00510000048837.
HOGENOMiHOG000112546.
HOVERGENiHBG051580.
InParanoidiQ5NBU5.
KOiK10314.
OMAiEGQCALR.
OrthoDBiEOG77M8P0.
PhylomeDBiQ5NBU5.
TreeFamiTF321665.

Miscellaneous databases

PROiQ5NBU5.
SOURCEiSearch...

Gene expression databases

BgeeiQ5NBU5.
CleanExiMM_FBXO39.

Family and domain databases

Gene3Di3.80.10.10. 1 hit.
InterProiIPR001810. F-box_dom.
IPR032675. L_dom-like.
[Graphical view]
PfamiPF12937. F-box-like. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6J.

Entry informationi

Entry nameiFBX39_MOUSE
AccessioniPrimary (citable) accession number: Q5NBU5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 15, 2005
Last sequence update: March 15, 2005
Last modified: June 8, 2016
This is version 91 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.