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Protein

Glucosidase 2 subunit beta

Gene

Os01g0276800

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regulatory subunit of glucosidase II. May be required for defense response elicited by pathogen-associated molecular patterns (PAMPs) (By similarity).By similarity

Pathwayi: N-glycan metabolism

This protein is involved in the pathway N-glycan metabolism, which is part of Glycan metabolism.
View all proteins of this organism that are known to be involved in the pathway N-glycan metabolism and in Glycan metabolism.

GO - Biological processi

Keywordsi

Biological processPlant defense

Enzyme and pathway databases

ReactomeiR-OSA-901042 Calnexin/calreticulin cycle
UniPathwayiUPA00957

Names & Taxonomyi

Protein namesi
Recommended name:
Glucosidase 2 subunit beta
Alternative name(s):
Glucosidase II subunit beta
Gene namesi
Ordered Locus Names:Os01g0276800
ORF Names:OsJ_01291, P0038F12.26
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Endoplasmic reticulum

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_000042597720 – 614Glucosidase 2 subunit betaAdd BLAST595

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi115N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ5NBP9

Expressioni

Gene expression databases

ExpressionAtlasiQ5NBP9 differential
GenevisibleiQ5NBP9 OS

Interactioni

Subunit structurei

Heterodimer of a catalytic alpha subunit and a beta subunit.By similarity

Protein-protein interaction databases

STRINGi39947.LOC_Os01g16970.1

Structurei

3D structure databases

ProteinModelPortaliQ5NBP9
SMRiQ5NBP9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi162 – 375Glu-rich (acidic)Add BLAST214
Compositional biasi376 – 418Asp-richAdd BLAST43

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG2397 Eukaryota
ENOG410XPE3 LUCA
InParanoidiQ5NBP9
KOiK08288
OMAiCYELTTN
OrthoDBiEOG093607YY

Family and domain databases

CDDicd00112 LDLa, 1 hit
Gene3Di2.70.130.10, 1 hit
InterProiView protein in InterPro
IPR026874 Glucosidase_2_bsu
IPR002172 LDrepeatLR_classA_rpt
IPR009011 Man6P_isomerase_rcpt-bd_dom_sf
IPR036607 PRKCSH
IPR028146 PRKCSH_N
PANTHERiPTHR12630:SF10 PTHR12630:SF10, 1 hit
PfamiView protein in Pfam
PF12999 PRKCSH-like, 1 hit
PF13015 PRKCSH_1, 1 hit
PROSITEiView protein in PROSITE
PS00014 ER_TARGET, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5NBP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLHAILLLL LLRISASAAA SRPPLDTLGI PPQDEAYFRG GVIRCRDGSG
60 70 80 90 100
RFARDKLNDD FCDCPDGTDE PGTSACPEGK FYCQNAGHSP ITIFSSRVND
110 120 130 140 150
GICDCCDGSD EYDSNVTCKN TCWEAGKAAR DKLKKKVATY KSGVVIRNQE
160 170 180 190 200
IQKAKVAFAK DEAELAKLKG EEKILQGLVD KLTEQKKLIE KAEEEERLRK
210 220 230 240 250
EKEEKRMKEE AEKQAADEKK ASDASQEVDS QENHETVQED ESKVAEHHDG
260 270 280 290 300
HATSHDNHTP ESESSVEQHD PESQDDISIK AAPADESPPE ETSAAPTKEQ
310 320 330 340 350
ESTPADSEGL SREELGRLVA SRWTGEKVDE VSKDDKNEHE AEHDMPEHSE
360 370 380 390 400
ETHEDESDVP ESAEDSYAGY HSEVEDDRHK YDDEDFSHES DDEYVDDHDE
410 420 430 440 450
HVASYKSDDD QKGDDHSDFT ASGQASWLDK IQQTVQNVLR TFNFFKTPVD
460 470 480 490 500
LSEASRVRKE YDDASSKLSK IQSRISTLTD KLKHDFGKEK EFYYFYDQCF
510 520 530 540 550
ESKEGKYVYK VCPFKKASQV EGHSTTSLGR WDKFEESYRV MQFSNGDRCW
560 570 580 590 600
NGPDRSLKVR LRCGLNNELN GVDEPSRCEY VAVLSTPALC DEQKLKELEQ
610
KLKASSNQRD HDEL
Length:614
Mass (Da):69,316
Last modified:February 1, 2005 - v1
Checksum:i2105F4D8F290DCA5
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti144V → F in EEE54323 (PubMed:15685292).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000836 Genomic DNA Translation: BAD81117.1
AP008207 Genomic DNA Translation: BAF04646.1
AP014957 Genomic DNA Translation: BAS71556.1
CM000138 Genomic DNA Translation: EEE54323.1
AK102926 mRNA Translation: BAG95785.1
RefSeqiXP_015621560.1, XM_015766074.1
XP_015621562.1, XM_015766076.1
UniGeneiOs.6899

Genome annotation databases

EnsemblPlantsiOs01t0276800-01; Os01t0276800-01; Os01g0276800
GeneIDi4324264
GrameneiOs01t0276800-01; Os01t0276800-01; Os01g0276800
KEGGiosa:4324264

Similar proteinsi

Entry informationi

Entry nameiGLU2B_ORYSJ
AccessioniPrimary (citable) accession number: Q5NBP9
Secondary accession number(s): A0A0P0V0Y0, B9EV73
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 16, 2014
Last sequence update: February 1, 2005
Last modified: May 23, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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