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Q5N8X6 (BGAL3_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Beta-galactosidase 3

Short name=Lactase 3
EC=3.2.1.23
Gene names
Ordered Locus Names:Os01g0875500, LOC_Os01g65460
ORF Names:P0648C09.21, P0698A10.24
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length851 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.

Subcellular location

Secretedextracellular spaceapoplast Potential.

Sequence similarities

Belongs to the glycosyl hydrolase 35 family.

Contains 1 SUEL-type lectin domain.

Sequence caution

The sequence BAB86232.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Cellular componentApoplast
Secreted
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

response to karrikin

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Cellular_componentapoplast

Inferred from electronic annotation. Source: UniProtKB-SubCell

plant-type cell wall

Inferred from electronic annotation. Source: EnsemblPlants/Gramene

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

carbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential
Chain30 – 851822Beta-galactosidase 3
PRO_0000294154

Regions

Domain765 – 85187SUEL-type lectin

Sites

Active site1941Proton donor Potential
Active site2631Nucleophile Potential

Amino acid modifications

Glycosylation351N-linked (GlcNAc...) Potential
Glycosylation3611N-linked (GlcNAc...) Potential
Glycosylation4751N-linked (GlcNAc...) Potential
Glycosylation5281N-linked (GlcNAc...) Potential
Glycosylation5331N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q5N8X6 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: D2E70688E717B2FD

FASTA85194,710
        10         20         30         40         50         60 
MAGASSYFSL RRLLLLLLPL VPLLGATTAA AAGANSSVTY DHRSLIISGR RRLLISTSIH 

        70         80         90        100        110        120 
YPRSVPEMWP KLVAEAKDGG ADCVETYVFW NGHEPAQGQY YFEERFDLVR FAKIVKDAGL 

       130        140        150        160        170        180 
YMILRIGPFV AAEWTFGGVP VWLHYAPGTV FRTNNEPFKS HMKRFTTYIV DMMKKEQFFA 

       190        200        210        220        230        240 
SQGGHIILAQ VENEYGDMEQ AYGAGAKPYA MWAASMALAQ NTGVPWIMCQ QYDAPDPVIN 

       250        260        270        280        290        300 
TCNSFYCDQF KPNSPTKPKF WTENWPGWFQ TFGESNPHRP PEDVAFSVAR FFGKGGSLQN 

       310        320        330        340        350        360 
YYVYHGGTNF GRTTGGPFIT TSYDYDAPID EYGLRRLPKW AHLRDLHKSI KLGEHTLLYG 

       370        380        390        400        410        420 
NSSFVSLGPQ QEADVYTDQS GGCVAFLSNV DSEKDKVVTF QSRSYDLPAW SVSILPDCKN 

       430        440        450        460        470        480 
VAFNTAKVRS QTLMMDMVPA NLESSKVDGW SIFREKYGIW GNIDLVRNGF VDHINTTKDS 

       490        500        510        520        530        540 
TDYLWYTTSF DVDGSHLAGG NHVLHIESKG HAVQAFLNNE LIGSAYGNGS KSNFSVEMPV 

       550        560        570        580        590        600 
NLRAGKNKLS LLSMTVGLQN GGPMYEWAGA GITSVKISGM ENRIIDLSSN KWEYKIGLEG 

       610        620        630        640        650        660 
EYYSLFKADK GKDIRWMPQS EPPKNQPMTW YKVNVDVPQG DDPVGLDMQS MGKGLAWLNG 

       670        680        690        700        710        720 
NAIGRYWPRI SPVSDRCTSS CDYRGTFSPN KCRRGCGQPT QRWYHVPRSW FHPSGNTLVI 

       730        740        750        760        770        780 
FEEKGGDPTK ITFSRRTVAS VCSFVSEHYP SIDLESWDRN TQNDGRDAAK VQLSCPKGKS 

       790        800        810        820        830        840 
ISSVKFVSFG NPSGTCRSYQ QGSCHHPNSI SVVEKACLNM NGCTVSLSDE GFGEDLCPGV 

       850 
TKTLAIEADC S 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence and structure of rice chromosome 1."
Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. expand/collapse author list , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"The rice annotation project database (RAP-DB): 2008 update."
The rice annotation project (RAP)
Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP003297 Genomic DNA. Translation: BAD82087.1.
AP003922 Genomic DNA. Translation: BAB86232.1. Sequence problems.
AP008207 Genomic DNA. Translation: BAF06878.1.
RefSeqNP_001044964.1. NM_001051499.1.
UniGeneOs.9892.

3D structure databases

ProteinModelPortalQ5N8X6.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH35. Glycoside Hydrolase Family 35.

Proteomic databases

PRIDEQ5N8X6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4324777.
KEGGosa:4324777.

Organism-specific databases

GrameneQ5N8X6.

Phylogenomic databases

eggNOGCOG1874.
ProtClustDBCLSN2692124.

Gene expression databases

ArrayExpressQ5N8X6.

Family and domain databases

Gene3D2.60.120.260. 2 hits.
3.20.20.80. 1 hit.
InterProIPR025300. BetaGal_jelly_roll_dom.
IPR008979. Galactose-bd-like.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
IPR000922. Lectin_gal-bd_dom.
[Graphical view]
PANTHERPTHR23421. PTHR23421. 1 hit.
PfamPF13364. BetaGal_dom4_5. 1 hit.
PF02140. Gal_Lectin. 1 hit.
PF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PRINTSPR00742. GLHYDRLASE35.
SUPFAMSSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEPS50228. SUEL_LECTIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameBGAL3_ORYSJ
AccessionPrimary (citable) accession number: Q5N8X6
Secondary accession number(s): Q8RYX9
Entry history
Integrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: February 1, 2005
Last modified: March 19, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries