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Protein
Submitted name:

Os01g0815800 protein

Gene

Os01g0815800

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

ReactomeiR-OSA-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-OSA-1799339 SRP-dependent cotranslational protein targeting to membrane
R-OSA-72689 Formation of a pool of free 40S subunits
R-OSA-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-OSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-OSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Submitted name:
Os01g0815800 proteinImported
Submitted name:
Putative 60S ribosomal protein L24Imported
Submitted name:
cDNA clone:001-018-A11, full insert sequenceImported
Submitted name:
cDNA clone:J033071P12, full insert sequenceImported
Gene namesi
Ordered Locus Names:Os01g0815800Imported
ORF Names:OsJ_03860Imported, OSJNBa0085D07.41Imported, OSNPB_010815800Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiQ5N754 differential

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os01g59990.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 46TRASHInterPro annotationAdd BLAST39

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili112 – 139Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1722 Eukaryota
COG2075 LUCA
KOiK02896
OMAiQGFLRLH
OrthoDBiEOG09360TX2

Family and domain databases

CDDicd00472 Ribosomal_L24e_L24, 1 hit
Gene3Di2.30.170.20, 1 hit
InterProiView protein in InterPro
IPR038630 L24e/L24_sf
IPR000988 Ribosomal_L24e-rel
IPR023442 Ribosomal_L24e_CS
IPR011017 TRASH_dom
PANTHERiPTHR10792 PTHR10792, 1 hit
PfamiView protein in Pfam
PF01246 Ribosomal_L24e, 1 hit
SMARTiView protein in SMART
SM00746 TRASH, 1 hit
PROSITEiView protein in PROSITE
PS01073 RIBOSOMAL_L24E, 1 hit

Sequencei

Sequence statusi: Complete.

Q5N754-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLKTELCRF SGQKIYPGKG IRFIRADSQV FLFANSKCKR YFHNRLKPAK
60 70 80 90 100
LTWTAMYRKQ HKKDIHAEAV KKRRRTTKKP YSRSIVGATL EVIQKKRSEK
110 120 130 140 150
PEVRDAAREA ALREIKERIK KTKDEKKAKK AEVAKSQKTQ SKGGATQRGA
160
KGPKIGGGGG KR
Length:162
Mass (Da):18,454
Last modified:February 1, 2005 - v1
Checksum:i7D0F1E3FD9E8DBE9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004331 Genomic DNA Translation: BAD82702.1
AP008207 Genomic DNA Translation: BAF06529.1
AK058612 mRNA Translation: BAG86753.1
AK101927 mRNA Translation: BAG95298.1
AP014957 Genomic DNA Translation: BAS74917.1
CM000138 Genomic DNA Translation: EEE55577.1
RefSeqiXP_015620714.1, XM_015765228.1
UniGeneiOs.4678

Genome annotation databases

EnsemblPlantsiOs01t0815800-01; Os01t0815800-01; Os01g0815800
GeneIDi4327483
GrameneiOs01t0815800-01; Os01t0815800-01; Os01g0815800
KEGGiosa:4327483

Similar proteinsi

Entry informationi

Entry nameiQ5N754_ORYSJ
AccessioniPrimary (citable) accession number: Q5N754
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: May 23, 2018
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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