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Protein
Submitted name:

Uncharacterized protein

Gene

syc0173_c

Organism
Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphorelay sensor kinase activity Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-178-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:syc0173_cImported
OrganismiSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)Imported
Taxonomic identifieri269084 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001175 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269084.syc0173_c.

Structurei

3D structure databases

ProteinModelPortaliQ5N5Q5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5001.
HOGENOMiHOG000130657.
OMAiQTIRVIR.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5N5Q5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDSLGIFLV LPLYDAWRQS KTINQSKFLW LGLGVLSLVI VLTLTFVLYP
60 70 80 90 100
VLLGISLLAL LGLALRVGLL GSAIGATLLS VISLLATRRG LGPFIRLAPD
110 120 130 140 150
NPYLAVILLM FSISLAVHIV ALQYAELRRQ RDHLQATINE QTNYLIDEIE
160 170 180 190 200
ALDKTQKELE DARDFAENLI QTANAIVLLL DLNGCILELN PTAEEVTGYQ
210 220 230 240 250
RSEILGKDWF ESIVPRDRYP HVWEQFKNCS SEEIPHNFEN PIITKSGKER
260 270 280 290 300
YIVWRNSKIF KNNECVGFIS FGIDITDRRD NEKALERQAC YDFLTGLANR
310 320 330 340 350
FLLQEQGQEL LLLAKRSQEM LAVIFIDLDR FKDINDNFGH EVGDRVLVEV
360 370 380 390 400
AQRIRQSVRQ SDLIARLSGD EFVVILPNTD AQGAATLAQK LQQQITPPIA
410 420 430 440 450
IGDRSIQLTT SLGISLFPVD GDDLEILIKK ADTAMYSIKE GGRDAFSFFT
460 470 480 490 500
ATIGQRLQER LEIESGLRSA IANQQFELFY QPQISLQDDS IIGLEALLRW
510 520 530 540 550
HHPHLGLLTP KSFLPIAIEI GLMEEIQQWV LKTACTQNAV WQAQGLKSVP
560 570 580 590 600
IGINFSGFQI QEFCPQIFEI LNETTLRPQY LELELNEAIL ADPDSGLKQG
610 620 630 640 650
LIQLKNLGLK MTVDDFGCSD STLASLQNKG LNRLKIDASL IQALEVDQAI
660 670 680 690 700
QTIVSAIIDL GHKLELRVLA EGVETEFQRQ WLQEHQCHEI QGYLVYLPLP
710
AEDIPAILRE QQ
Length:712
Mass (Da):80,043
Last modified:February 1, 2005 - v1
Checksum:i0F594825686E1E26
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD78363.1.
RefSeqiYP_170883.1. NC_006576.1.

Genome annotation databases

EnsemblBacteriaiBAD78363; BAD78363; syc0173_c.
KEGGisyc:syc0173_c.
PATRICi32485853. VBISynElo117686_0205.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD78363.1.
RefSeqiYP_170883.1. NC_006576.1.

3D structure databases

ProteinModelPortaliQ5N5Q5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269084.syc0173_c.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD78363; BAD78363; syc0173_c.
KEGGisyc:syc0173_c.
PATRICi32485853. VBISynElo117686_0205.

Phylogenomic databases

eggNOGiCOG5001.
HOGENOMiHOG000130657.
OMAiQTIRVIR.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-178-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
    Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
    Photosyn. Res. 93:55-67(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1Imported.

Entry informationi

Entry nameiQ5N5Q5_SYNP6
AccessioniPrimary (citable) accession number: Q5N5Q5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: April 1, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.