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Q5N5Q5 (Q5N5Q5_SYNP6) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length712 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5N5Q5 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 0F594825686E1E26

FASTA71280,043
        10         20         30         40         50         60 
MGDSLGIFLV LPLYDAWRQS KTINQSKFLW LGLGVLSLVI VLTLTFVLYP VLLGISLLAL 

        70         80         90        100        110        120 
LGLALRVGLL GSAIGATLLS VISLLATRRG LGPFIRLAPD NPYLAVILLM FSISLAVHIV 

       130        140        150        160        170        180 
ALQYAELRRQ RDHLQATINE QTNYLIDEIE ALDKTQKELE DARDFAENLI QTANAIVLLL 

       190        200        210        220        230        240 
DLNGCILELN PTAEEVTGYQ RSEILGKDWF ESIVPRDRYP HVWEQFKNCS SEEIPHNFEN 

       250        260        270        280        290        300 
PIITKSGKER YIVWRNSKIF KNNECVGFIS FGIDITDRRD NEKALERQAC YDFLTGLANR 

       310        320        330        340        350        360 
FLLQEQGQEL LLLAKRSQEM LAVIFIDLDR FKDINDNFGH EVGDRVLVEV AQRIRQSVRQ 

       370        380        390        400        410        420 
SDLIARLSGD EFVVILPNTD AQGAATLAQK LQQQITPPIA IGDRSIQLTT SLGISLFPVD 

       430        440        450        460        470        480 
GDDLEILIKK ADTAMYSIKE GGRDAFSFFT ATIGQRLQER LEIESGLRSA IANQQFELFY 

       490        500        510        520        530        540 
QPQISLQDDS IIGLEALLRW HHPHLGLLTP KSFLPIAIEI GLMEEIQQWV LKTACTQNAV 

       550        560        570        580        590        600 
WQAQGLKSVP IGINFSGFQI QEFCPQIFEI LNETTLRPQY LELELNEAIL ADPDSGLKQG 

       610        620        630        640        650        660 
LIQLKNLGLK MTVDDFGCSD STLASLQNKG LNRLKIDASL IQALEVDQAI QTIVSAIIDL 

       670        680        690        700        710 
GHKLELRVLA EGVETEFQRQ WLQEHQCHEI QGYLVYLPLP AEDIPAILRE QQ 

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References

[1]"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008231 Genomic DNA. Translation: BAD78363.1.
RefSeqYP_170883.1. NC_006576.1.

3D structure databases

ProteinModelPortalQ5N5Q5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269084.syc0173_c.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD78363; BAD78363; syc0173_c.
GeneID3198475.
KEGGsyc:syc0173_c.
PATRIC32485853. VBISynElo117686_0205.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5001.
HOGENOMHOG000130657.
OMAELEINES.
OrthoDBEOG69GZGV.
ProtClustDBCLSK743445.

Enzyme and pathway databases

BioCycSELO269084:GCDQ-178-MONOMER.

Family and domain databases

Gene3D3.20.20.450. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR000160. GGDEF_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
[Graphical view]
PfamPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5N5Q5_SYNP6
AccessionPrimary (citable) accession number: Q5N5Q5
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: April 16, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)