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Q5N5M8 (Q5N5M8_SYNP6) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:syc0200_d EMBL BAD78390.1
OrganismSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) [Complete proteome] [HAMAP] EMBL BAD78390.1
Taxonomic identifier269084 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length929 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5N5M8 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 2E3AAF1C2CD2F646

FASTA929105,745
        10         20         30         40         50         60 
MTYSEVHWRL LLVDDDEDDF IITRDLLRDA QQAQIQLDWC SDFQEALATM GRQEHDVYLV 

        70         80         90        100        110        120 
DYRLGAESGL DLIDQAIQAG ITRPIILLTG QGNEQLDASA IELGAADYLV KGQLDCQQLL 

       130        140        150        160        170        180 
RSIRYAIDRN LATTRLAESE SRYRLLFEAN PEPMWVFAKQ GLQFLAVNQA ASQFFGYSQQ 

       190        200        210        220        230        240 
EFLAMTVLDI QSEEEKTRFL QFFESLICNQ IVDPAVGVWA YRHKQGHLVF ADVLIHDFEF 

       250        260        270        280        290        300 
DNQPCCLILA IDITEKQAAR ELAHQREQAF RKLLNDNRDP LLVISGDRRI CYANPAAQKL 

       310        320        330        340        350        360 
LKLNLEQLES QSLDLPLLSD KLTEWALTLP DGSVAEVEIH RSETDWEGQP ADLLSLRDIA 

       370        380        390        400        410        420 
ERKASEQQLR LLKESLEASF NGVVIVDAIE PDMPVIYVNP AFERITGYSE AEMLGRNCRI 

       430        440        450        460        470        480 
LQGNERDSLQ IEEIHRGLSQ AENVHVVIRN FRKDGQPFWN DLYISPIFNA QGNVTHFIGV 

       490        500        510        520        530        540 
QNDITEQKRY EEELSFSASH DVLTGLPNRA VLEDRLRQGC KMALRQKHSL AILFIDLDGF 

       550        560        570        580        590        600 
KLINDSIGHR SGDLLLVEVA QRMCEQVRAG DTVARIGGDE FIILLVDLKL ENDVISIADR 

       610        620        630        640        650        660 
LLASVARPYH IQGIYLHVTA SMGITLSDGD IEQPTQLIQQ ADLAMYKAKQ EGRNNYQWYT 

       670        680        690        700        710        720 
NDLNLRLRER VHLRNELQKA IETEAFELYF QPKIEGCSGQ VIGLEALLRW QHPQMGFISP 

       730        740        750        760        770        780 
ATFVPIAEDT GQIIPLSQWV LETACRQLRD LLQQGIAAPS VAVNISTVQF RRINFVKSVQ 

       790        800        810        820        830        840 
SALQKYQLKS EHLEIEITEN VLFDNTEKAI EKLQRLKELG VNISIDDFGT GFSSLSYLKE 

       850        860        870        880        890        900 
LPIDTVKIDR SFVQEINTDS RDAAITQGII SMAHHLRLNV VAEGVETEQQ FKFLQQSNCD 

       910        920 
QYQGYYFAKP MPFEALKQYL MDEAARELP 

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References

[1]"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008231 Genomic DNA. Translation: BAD78390.1.
RefSeqYP_170910.1. NC_006576.1.

3D structure databases

ProteinModelPortalQ5N5M8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269084.syc0200_d.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD78390; BAD78390; syc0200_d.
GeneID3199234.
KEGGsyc:syc0200_d.
PATRIC32485924. VBISynElo117686_0239.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
OMARRICYAN.
OrthoDBEOG69GZGV.

Enzyme and pathway databases

BioCycSELO269084:GCDQ-206-MONOMER.

Family and domain databases

Gene3D3.20.20.450. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR011006. CheY-like_superfamily.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR000160. GGDEF_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF13188. PAS_8. 2 hits.
PF13426. PAS_9. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
SSF52172. SSF52172. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 3 hits.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 2 hits.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 3 hits.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5N5M8_SYNP6
AccessionPrimary (citable) accession number: Q5N5M8
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: May 14, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)