Q5N5M8 (Q5N5M8_SYNP6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Two-component response regulator EMBL BAD78390.1

Gene names

Ordered Locus Names:

syc0200_d

Organism

Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) [Complete proteome] [HAMAP]

Taxonomic identifier

269084 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Synechococcus › Synechococcus elongatus

Protein attributes

Sequence length	929 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cyclic nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro signal transduction by phosphorylation Inferred from electronic annotation. Source: GOC
Molecular_function	phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro phosphorelay sensor kinase activity Inferred from electronic annotation. Source: InterPro phosphorus-oxygen lyase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5N5M8 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: 2E3AAF1C2CD2F646	FASTA	929	105,745
	10 20 30 40 50 60 MTYSEVHWRL LLVDDDEDDF IITRDLLRDA QQAQIQLDWC SDFQEALATM GRQEHDVYLV 70 80 90 100 110 120 DYRLGAESGL DLIDQAIQAG ITRPIILLTG QGNEQLDASA IELGAADYLV KGQLDCQQLL 130 140 150 160 170 180 RSIRYAIDRN LATTRLAESE SRYRLLFEAN PEPMWVFAKQ GLQFLAVNQA ASQFFGYSQQ 190 200 210 220 230 240 EFLAMTVLDI QSEEEKTRFL QFFESLICNQ IVDPAVGVWA YRHKQGHLVF ADVLIHDFEF 250 260 270 280 290 300 DNQPCCLILA IDITEKQAAR ELAHQREQAF RKLLNDNRDP LLVISGDRRI CYANPAAQKL 310 320 330 340 350 360 LKLNLEQLES QSLDLPLLSD KLTEWALTLP DGSVAEVEIH RSETDWEGQP ADLLSLRDIA 370 380 390 400 410 420 ERKASEQQLR LLKESLEASF NGVVIVDAIE PDMPVIYVNP AFERITGYSE AEMLGRNCRI 430 440 450 460 470 480 LQGNERDSLQ IEEIHRGLSQ AENVHVVIRN FRKDGQPFWN DLYISPIFNA QGNVTHFIGV 490 500 510 520 530 540 QNDITEQKRY EEELSFSASH DVLTGLPNRA VLEDRLRQGC KMALRQKHSL AILFIDLDGF 550 560 570 580 590 600 KLINDSIGHR SGDLLLVEVA QRMCEQVRAG DTVARIGGDE FIILLVDLKL ENDVISIADR 610 620 630 640 650 660 LLASVARPYH IQGIYLHVTA SMGITLSDGD IEQPTQLIQQ ADLAMYKAKQ EGRNNYQWYT 670 680 690 700 710 720 NDLNLRLRER VHLRNELQKA IETEAFELYF QPKIEGCSGQ VIGLEALLRW QHPQMGFISP 730 740 750 760 770 780 ATFVPIAEDT GQIIPLSQWV LETACRQLRD LLQQGIAAPS VAVNISTVQF RRINFVKSVQ 790 800 810 820 830 840 SALQKYQLKS EHLEIEITEN VLFDNTEKAI EKLQRLKELG VNISIDDFGT GFSSLSYLKE 850 860 870 880 890 900 LPIDTVKIDR SFVQEINTDS RDAAITQGII SMAHHLRLNV VAEGVETEQQ FKFLQQSNCD 910 920 QYQGYYFAKP MPFEALKQYL MDEAARELP

References

[1]

"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization." Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M. Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008231 Genomic DNA. Translation: BAD78390.1.
RefSeq	YP_170910.1. NC_006576.1.
3D structure databases
ProteinModelPortal	Q5N5M8.
ModBase	Search...
Protein-protein interaction databases
STRING	269084.syc0200_d.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAD78390; BAD78390; syc0200_d.
GeneID	3199234.
KEGG	syc:syc0200_d.
PATRIC	32485924. VBISynElo117686_0239.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2202.
OMA	NDIVREN.
ProtClustDB	CLSK743456.
Family and domain databases
Gene3D	3.20.20.450. 1 hit.
InterPro	IPR001054. A/G_cyclase. IPR011006. CheY-like_superfamily. IPR001633. Diguanylate_PEstase_EAL_dom. IPR000160. GGDEF_dom. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. IPR001789. Sig_transdc_resp-reg_receiver. [Graphical view]
Pfam	PF00563. EAL. 1 hit. PF00990. GGDEF. 1 hit. PF13188. PAS_8. 2 hits. PF00072. Response_reg. 1 hit. [Graphical view]
SMART	SM00052. EAL. 1 hit. SM00267. GGDEF. 1 hit. SM00086. PAC. 3 hits. SM00091. PAS. 3 hits. SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF55073. A/G_cyclase. 1 hit. SSF52172. CheY_like. 1 hit. SSF141868. SSF141868. 1 hit.
TIGRFAMs	TIGR00254. GGDEF. 1 hit. TIGR00229. sensory_box. 2 hits.
PROSITE	PS50883. EAL. 1 hit. PS50887. GGDEF. 1 hit. PS50113. PAC. 1 hit. PS50112. PAS. 3 hits. PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5N5M8_SYNP6

Accession

Primary (citable) accession number: Q5N5M8

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 2005
Last sequence update:	February 1, 2005
Last modified:	May 1, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)