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Protein
Submitted name:

Two-component response regulator

Gene

syc0200_d

Organism
Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphorelay sensor kinase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-206-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Two-component response regulatorImported
Gene namesi
Ordered Locus Names:syc0200_dImported
OrganismiSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)Imported
Taxonomic identifieri269084 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001175: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269084.syc0200_d.

Structurei

3D structure databases

ProteinModelPortaliQ5N5M8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
OMAiRRICYAN.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF13188. PAS_8. 2 hits.
PF13426. PAS_9. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF52172. SSF52172. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 3 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 2 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 3 hits.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5N5M8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTYSEVHWRL LLVDDDEDDF IITRDLLRDA QQAQIQLDWC SDFQEALATM
60 70 80 90 100
GRQEHDVYLV DYRLGAESGL DLIDQAIQAG ITRPIILLTG QGNEQLDASA
110 120 130 140 150
IELGAADYLV KGQLDCQQLL RSIRYAIDRN LATTRLAESE SRYRLLFEAN
160 170 180 190 200
PEPMWVFAKQ GLQFLAVNQA ASQFFGYSQQ EFLAMTVLDI QSEEEKTRFL
210 220 230 240 250
QFFESLICNQ IVDPAVGVWA YRHKQGHLVF ADVLIHDFEF DNQPCCLILA
260 270 280 290 300
IDITEKQAAR ELAHQREQAF RKLLNDNRDP LLVISGDRRI CYANPAAQKL
310 320 330 340 350
LKLNLEQLES QSLDLPLLSD KLTEWALTLP DGSVAEVEIH RSETDWEGQP
360 370 380 390 400
ADLLSLRDIA ERKASEQQLR LLKESLEASF NGVVIVDAIE PDMPVIYVNP
410 420 430 440 450
AFERITGYSE AEMLGRNCRI LQGNERDSLQ IEEIHRGLSQ AENVHVVIRN
460 470 480 490 500
FRKDGQPFWN DLYISPIFNA QGNVTHFIGV QNDITEQKRY EEELSFSASH
510 520 530 540 550
DVLTGLPNRA VLEDRLRQGC KMALRQKHSL AILFIDLDGF KLINDSIGHR
560 570 580 590 600
SGDLLLVEVA QRMCEQVRAG DTVARIGGDE FIILLVDLKL ENDVISIADR
610 620 630 640 650
LLASVARPYH IQGIYLHVTA SMGITLSDGD IEQPTQLIQQ ADLAMYKAKQ
660 670 680 690 700
EGRNNYQWYT NDLNLRLRER VHLRNELQKA IETEAFELYF QPKIEGCSGQ
710 720 730 740 750
VIGLEALLRW QHPQMGFISP ATFVPIAEDT GQIIPLSQWV LETACRQLRD
760 770 780 790 800
LLQQGIAAPS VAVNISTVQF RRINFVKSVQ SALQKYQLKS EHLEIEITEN
810 820 830 840 850
VLFDNTEKAI EKLQRLKELG VNISIDDFGT GFSSLSYLKE LPIDTVKIDR
860 870 880 890 900
SFVQEINTDS RDAAITQGII SMAHHLRLNV VAEGVETEQQ FKFLQQSNCD
910 920
QYQGYYFAKP MPFEALKQYL MDEAARELP
Length:929
Mass (Da):105,745
Last modified:February 1, 2005 - v1
Checksum:i2E3AAF1C2CD2F646
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD78390.1.
RefSeqiWP_011242514.1. NC_006576.1.
YP_170910.1. NC_006576.1.

Genome annotation databases

EnsemblBacteriaiBAD78390; BAD78390; syc0200_d.
GeneIDi3199234.
KEGGisyc:syc0200_d.
PATRICi32485924. VBISynElo117686_0239.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD78390.1.
RefSeqiWP_011242514.1. NC_006576.1.
YP_170910.1. NC_006576.1.

3D structure databases

ProteinModelPortaliQ5N5M8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269084.syc0200_d.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD78390; BAD78390; syc0200_d.
GeneIDi3199234.
KEGGisyc:syc0200_d.
PATRICi32485924. VBISynElo117686_0239.

Phylogenomic databases

eggNOGiCOG2202.
OMAiRRICYAN.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-206-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF13188. PAS_8. 2 hits.
PF13426. PAS_9. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF52172. SSF52172. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 3 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 2 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 3 hits.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
    Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
    Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1Imported.

Entry informationi

Entry nameiQ5N5M8_SYNP6
AccessioniPrimary (citable) accession number: Q5N5M8
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: January 7, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.