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Q5N537 (Q5N537_SYNP6) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1059 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5N537 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 12020F1FD418FC56

FASTA1,059121,069
        10         20         30         40         50         60 
MASRCSICRT PTMEQSSRQF FEQISREDWE QTPESVQQLV RALLAESDLV TEESEQASTG 

        70         80         90        100        110        120 
RLAIDQYFRE SLRYQQVVEA QTDLILRSRS DTTVVFANKP LCQVLGWQDG DISGQTWGNL 

       130        140        150        160        170        180 
VPPNDLSELH EKIAGLSLEN PTFESLNRNY GADQRIKWIQ WVNQGIFNDR GELIEIQSVG 

       190        200        210        220        230        240 
RDVTTLIEQI TREKTLNYVF EAIRNSLDLE VIFATATKEL AKTLNGLDCY IVQYLEEQRI 

       250        260        270        280        290        300 
WTHVAEFQHD ENQESRLGIE IQDLDNPFAE QLKKFQVVRV ENTQNINDKI NRELAKSTPG 

       310        320        330        340        350        360 
AWLLVPLIVE EKLWGSFTIV SNQKPFIWSD GYVDLARSIS RQLEIAIYQA DLYQKIQQEL 

       370        380        390        400        410        420 
SDRSKAELAL QESQTRFQRI ADNLPGIIYG YKLRQDGTDQ FTYISSGFRE VYGIDPETAL 

       430        440        450        460        470        480 
ENSNVVWGMI HPEDIEYLKT SIIKSQQTLK TWKVEYRIIT KNGELKWMQG RARPTRQENG 

       490        500        510        520        530        540 
ETFWDGLIID ISDRKKIEAE LQTSEERYRL LAENMNDLVC LHQADGTYLY VSPSAEALLG 

       550        560        570        580        590        600 
FSSEEMVGQN PYDFFHPEDC DRIRDEAHQA VLMGAELPIV YRMRKKLGGY IWFETLTKPI 

       610        620        630        640        650        660 
MDDQGVVIGL QTTSRDVTQR IEIQNQLQYD ACHDSLTGLA NRNLLIERLE LSLKRSKRLQ 

       670        680        690        700        710        720 
NYKYAVLFLD LDRFKVINDS LGHITGDQLL VSIAQKLQSI IRSHDLAARL GGDEFVVLVE 

       730        740        750        760        770        780 
DIQTFDEPIK VAERILAAIQ VPLELEERSI YTSTSIGIVF GSHEYESATQ LLRDADTAMY 

       790        800        810        820        830        840 
RAKSRGRARY EVFDSAMHSQ ALARLHLEND LRQAIARQEF VLYYQPIIQL QTGKITGFEA 

       850        860        870        880        890        900 
LIRWQHPTEG IKLPIDLIPI AEETGLITSI DYWVLNQACR QLSEWQASYS QAADLSMSVN 

       910        920        930        940        950        960 
LSAQNLQHDH LMDEIQSVLQ ATKIKPGSLT LEITESMLIE NTDQTIQLLA AINEQGIEIS 

       970        980        990       1000       1010       1020 
IDDFGTGYSS LSYLHKLPVN NLKVDGSFVR KITTESTNYQ IVNTIIALNN QLGLKAIAEG 

      1030       1040       1050 
IETHEQLDLL SQLGYQYGQG YLFARPLNAK DVEQLFLSN 

« Hide

References

[1]"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008231 Genomic DNA. Translation: BAD78582.1.
RefSeqYP_171102.1. NC_006576.1.

3D structure databases

ProteinModelPortalQ5N537.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269084.syc0392_d.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD78582; BAD78582; syc0392_d.
GeneID3200189.
KEGGsyc:syc0392_d.
PATRIC32486354. VBISynElo117686_0453.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000088051.
OMAYIWFETL.
OrthoDBEOG69GZGV.
ProtClustDBCLSK743502.

Enzyme and pathway databases

BioCycSELO269084:GCDQ-399-MONOMER.

Family and domain databases

Gene3D3.20.20.450. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR003018. GAF.
IPR000160. GGDEF_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR013655. PAS_fold_3.
[Graphical view]
PfamPF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF08447. PAS_3. 2 hits.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 3 hits.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 3 hits.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 2 hits.
PS50112. PAS. 3 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5N537_SYNP6
AccessionPrimary (citable) accession number: Q5N537
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: April 16, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)