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Protein
Submitted name:

Uncharacterized protein

Gene

syc0392_d

Organism
Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphorelay sensor kinase activity Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-399-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:syc0392_dImported
OrganismiSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)Imported
Taxonomic identifieri269084 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001175: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269084.syc0392_d.

Structurei

3D structure databases

ProteinModelPortaliQ5N537.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000088051.
OMAiYIWFETL.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF08447. PAS_3. 2 hits.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 3 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 3 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 2 hits.
PS50112. PAS. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5N537-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASRCSICRT PTMEQSSRQF FEQISREDWE QTPESVQQLV RALLAESDLV
60 70 80 90 100
TEESEQASTG RLAIDQYFRE SLRYQQVVEA QTDLILRSRS DTTVVFANKP
110 120 130 140 150
LCQVLGWQDG DISGQTWGNL VPPNDLSELH EKIAGLSLEN PTFESLNRNY
160 170 180 190 200
GADQRIKWIQ WVNQGIFNDR GELIEIQSVG RDVTTLIEQI TREKTLNYVF
210 220 230 240 250
EAIRNSLDLE VIFATATKEL AKTLNGLDCY IVQYLEEQRI WTHVAEFQHD
260 270 280 290 300
ENQESRLGIE IQDLDNPFAE QLKKFQVVRV ENTQNINDKI NRELAKSTPG
310 320 330 340 350
AWLLVPLIVE EKLWGSFTIV SNQKPFIWSD GYVDLARSIS RQLEIAIYQA
360 370 380 390 400
DLYQKIQQEL SDRSKAELAL QESQTRFQRI ADNLPGIIYG YKLRQDGTDQ
410 420 430 440 450
FTYISSGFRE VYGIDPETAL ENSNVVWGMI HPEDIEYLKT SIIKSQQTLK
460 470 480 490 500
TWKVEYRIIT KNGELKWMQG RARPTRQENG ETFWDGLIID ISDRKKIEAE
510 520 530 540 550
LQTSEERYRL LAENMNDLVC LHQADGTYLY VSPSAEALLG FSSEEMVGQN
560 570 580 590 600
PYDFFHPEDC DRIRDEAHQA VLMGAELPIV YRMRKKLGGY IWFETLTKPI
610 620 630 640 650
MDDQGVVIGL QTTSRDVTQR IEIQNQLQYD ACHDSLTGLA NRNLLIERLE
660 670 680 690 700
LSLKRSKRLQ NYKYAVLFLD LDRFKVINDS LGHITGDQLL VSIAQKLQSI
710 720 730 740 750
IRSHDLAARL GGDEFVVLVE DIQTFDEPIK VAERILAAIQ VPLELEERSI
760 770 780 790 800
YTSTSIGIVF GSHEYESATQ LLRDADTAMY RAKSRGRARY EVFDSAMHSQ
810 820 830 840 850
ALARLHLEND LRQAIARQEF VLYYQPIIQL QTGKITGFEA LIRWQHPTEG
860 870 880 890 900
IKLPIDLIPI AEETGLITSI DYWVLNQACR QLSEWQASYS QAADLSMSVN
910 920 930 940 950
LSAQNLQHDH LMDEIQSVLQ ATKIKPGSLT LEITESMLIE NTDQTIQLLA
960 970 980 990 1000
AINEQGIEIS IDDFGTGYSS LSYLHKLPVN NLKVDGSFVR KITTESTNYQ
1010 1020 1030 1040 1050
IVNTIIALNN QLGLKAIAEG IETHEQLDLL SQLGYQYGQG YLFARPLNAK

DVEQLFLSN
Length:1,059
Mass (Da):121,069
Last modified:February 1, 2005 - v1
Checksum:i12020F1FD418FC56
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD78582.1.
RefSeqiYP_171102.1. NC_006576.1.

Genome annotation databases

EnsemblBacteriaiBAD78582; BAD78582; syc0392_d.
GeneIDi3200189.
KEGGisyc:syc0392_d.
PATRICi32486354. VBISynElo117686_0453.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD78582.1.
RefSeqiYP_171102.1. NC_006576.1.

3D structure databases

ProteinModelPortaliQ5N537.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269084.syc0392_d.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD78582; BAD78582; syc0392_d.
GeneIDi3200189.
KEGGisyc:syc0392_d.
PATRICi32486354. VBISynElo117686_0453.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000088051.
OMAiYIWFETL.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-399-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
3.30.450.40. 1 hit.
InterProiIPR001633. EAL_dom.
IPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR013655. PAS_fold_3.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF01590. GAF. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF08447. PAS_3. 2 hits.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00065. GAF. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 3 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 3 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 2 hits.
PS50112. PAS. 3 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
    Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
    Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1Imported.

Entry informationi

Entry nameiQ5N537_SYNP6
AccessioniPrimary (citable) accession number: Q5N537
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: March 4, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.