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Q5N4N7 (Q5N4N7_SYNP6) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:trpE EMBL BAD78732.1
Ordered Locus Names:syc0542_c
OrganismSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) [Complete proteome] [HAMAP]
Taxonomic identifier269084 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaChroococcalesSynechococcus

Protein attributes

Sequence length517 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionoxo-acid-lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5N4N7 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: DF843A8F63A04055

FASTA51757,860
        10         20         30         40         50         60 
MIYPDFATFA SLAEQGNFIP VYQEWVADLD TPVSAWYRIC RDRPYSFLLE SVEGGEHLGR 

        70         80         90        100        110        120 
YSFLGCDPLW VLEARGDRTT RRFRDGSEEV FSGDPFAALK QCLAPYQPVH LPQLPSGVGG 

       130        140        150        160        170        180 
LFGFWGYELM RWIEPRVPVH SGGENDLPDG CWMQVDSLMI FDQVKRRLYA IAYADLQAEP 

       190        200        210        220        230        240 
DLHRAYALAC NRVQELVNRF QGSLSASDRQ LPWLPPQSAP SRPVDYQSNT TQEQFCANVL 

       250        260        270        280        290        300 
TAQDYIRAGD IFQVVLSQRL TTHYSGDPFD LYRSLRLINP SPYMAFFRFG DWQLIGSSPE 

       310        320        330        340        350        360 
VMVKAEQDPH QSDRQVATVR PIAGTRPRVR TAPEDAALAT DLLADPKEVA EHVMLVDLGR 

       370        380        390        400        410        420 
NDLGRVCEKG SVRVDELMVI ERYSHVMHIV SNVVGLLDRD RDAWDLLRAT FPAGTVSGAP 

       430        440        450        460        470        480 
KIRAMEIIHE LEGCRRGPYS GAYGYYDFEG QLNTAITIRT MIVQAEGSGH RVSVQAGAGV 

       490        500        510 
VADSVPIKEY EETLNKARGL LEAIRCLQPP QVPVAAG 

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References

[1]"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
Photosyn. Res. 93:55-67(2007) [PubMed: 17211581] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008231 Genomic DNA. Translation: BAD78732.1.
RefSeqYP_171252.1. NC_006576.1.

3D structure databases

ProteinModelPortalQ5N4N7.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5N4N7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3197786.
GenomeReviewsGene locus syc0542_c in contig AP008231_GR.
KEGGsyc:syc0542_c.
PATRIC32486708. VBISynElo117686_0628.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0147.
HOGENOMHBG507440.
OMAPSQRMSM.
PhylomeDBQ5N4N7.
ProtClustDBCLSK892483.

Enzyme and pathway databases

BioCycSELO269084:SYC0542_C-MONOMER.

Family and domain databases

InterProIPR005801. ADC_synthase.
IPR019999. Anth_synth_I.
IPR006805. Anth_synth_I_N.
IPR015890. Chorismate-bd_C.
[Graphical view]
Gene3DG3DSA:3.60.120.10. TRPE_1_chor_bd. 1 hit.
KOK01657.
PfamPF04715. Anth_synt_I_N. 1 hit.
PF00425. Chorismate_bind. 1 hit.
[Graphical view]
PRINTSPR00095. ANTSNTHASEI.
SUPFAMSSF56322. TRPE_1_chor_bd. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5N4N7_SYNP6
AccessionPrimary (citable) accession number: Q5N4N7
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)