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Q5N469 (Q5N469_SYNP6) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Asparagine--tRNA ligase HAMAP MF_00534
EC=6.1.1.22 HAMAP MF_00534
Alternative name(s):
Asparaginyl-tRNA synthetase HAMAP MF_00534
Gene names
Name:asnS HAMAP MF_00534 EMBL BAD78900.1
Ordered Locus Names:syc0710_c
OrganismSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) [Complete proteome] [HAMAP]
Taxonomic identifier269084 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length462 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn). HAMAP MF_00534 SAAS SAAS004522

Subunit structure

Homodimer By similarity. HAMAP MF_00534

Subcellular location

Cytoplasm By similarity HAMAP MF_00534.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00534 RuleBase RU003746

Sequences

Sequence LengthMass (Da)Tools
Q5N469 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: E9003778B30F50E4

FASTA46252,142
        10         20         30         40         50         60 
MASARIVDLL SQGQPGQTVV VRGWIRTARQ LKEFTFVEVN DGSCLKGIQV VLGQELADYE 

        70         80         90        100        110        120 
MLAKQLDTGA AIAVEGQLVA SPAKGQRVEL QAASVEIVGG ADPEQYPLQK KRHSFEFLRT 

       130        140        150        160        170        180 
IAHLRPRTNS LGAVMRVRNA AATAIHDFFQ ERGFLWVHTP IITASDCEGA GELFTVTNLD 

       190        200        210        220        230        240 
LDKLGQSQQA PDFEQDFFGK RAYLTVSGQL EAEIMGLGFS NVYTFGPTFR AENSNTSRHL 

       250        260        270        280        290        300 
AEFWMVEPET AFCDLGGDMD LAEAFLKFVF QRVSDRCSED LEFFNQRIDS EVLNRAETIL 

       310        320        330        340        350        360 
NNDFERVSYT DAIALLEKAD RSFDYPVAWG IDLQSEHERY LAEEYFRKPL IVYDYPREIK 

       370        380        390        400        410        420 
ALYMRLNDDQ KTVAAMDVLA PGIGEIIGGS QREERLGVLK QRLAEANLPE ENYWWYLDLW 

       430        440        450        460 
RYGSVPHAGF GLGFERLVQF ITGMGNIRDV IPFPRTPQNA EF

« Hide

References

[1]"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
Photosyn. Res. 93:55-67(2007) [PubMed: 17211581] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AP008231 Genomic DNA. Translation: BAD78900.1.
RefSeqYP_171420.1. NC_006576.1.

3D structure databases

ProteinModelPortalQ5N469.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5N469.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3198001.
GenomeReviewsGene locus syc0710_c in contig AP008231_GR.
KEGGsyc:syc0710_c.
PATRIC32487092. VBISynElo117686_0817.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0017.
HOGENOMHBG745843.
OMAAIHRFFH.
PhylomeDBQ5N469.
ProtClustDBPRK03932.

Enzyme and pathway databases

BioCycSELO269084:SYC0710_C-MONOMER.

Family and domain databases

HAMAPMF_00534. Asn_tRNA_synth.
[Tree]
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-synth_IIb.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KOK01893.
PANTHERPTHR22594. aa-tRNA-synt_II. 1 hit.
PTHR22594:SF6. PTHR22594:SF6. 1 hit.
PfamPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00457. AsnS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5N469_SYNP6
AccessionPrimary (citable) accession number: Q5N469
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: January 25, 2012
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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