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Protein

Putative 3-methyladenine DNA glycosylase

Gene

syc0860_c

Organism
Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

DNA damage, DNA repair

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-876-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative 3-methyladenine DNA glycosylaseUniRule annotation (EC:3.2.2.-UniRule annotation)
Gene namesi
Ordered Locus Names:syc0860_c
OrganismiSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)
Taxonomic identifieri269084 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001175 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 199199Putative 3-methyladenine DNA glycosylasePRO_0000265063Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi269084.syc0860_c.

Structurei

3D structure databases

ProteinModelPortaliQ5N3S0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DNA glycosylase MPG family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2094.
HOGENOMiHOG000224224.
KOiK03652.
OMAiDEACHAW.
OrthoDBiEOG6Q2SQ1.

Family and domain databases

Gene3Di3.10.300.10. 1 hit.
HAMAPiMF_00527. 3MGH.
InterProiIPR011034. Formyl_transferase_C-like.
IPR003180. PurDNA_glycsylse.
[Graphical view]
PANTHERiPTHR10429. PTHR10429. 1 hit.
PfamiPF02245. Pur_DNA_glyco. 1 hit.
[Graphical view]
SUPFAMiSSF50486. SSF50486. 1 hit.
TIGRFAMsiTIGR00567. 3mg. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5N3S0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTAALLESP WHPLLSQPAT EAAIALLGCW LVRRFADGRV IRGRIVETEA
60 70 80 90 100
YEAGDPACHG YRRQTARNRS MFGPPGQVYV YQIYGRYHCI NLATEAADLA
110 120 130 140 150
SAVLIRALEF PDTEAIAGAG PGRLCRFLAI DRQLDGSWLG PTSPLDLEAA
160 170 180 190
DYPLGTLIQT TRIGLTRGVD LPWRWYLAES PAVSRRDRRA EAEQMGVSV
Length:199
Mass (Da):21,927
Last modified:February 1, 2005 - v1
Checksum:i1DB04C802F5867A2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD79050.1.
RefSeqiWP_011243172.1. NC_006576.1.
YP_171570.1. NC_006576.1.

Genome annotation databases

EnsemblBacteriaiBAD79050; BAD79050; syc0860_c.
KEGGisyc:syc0860_c.
PATRICi32487470. VBISynElo117686_1003.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD79050.1.
RefSeqiWP_011243172.1. NC_006576.1.
YP_171570.1. NC_006576.1.

3D structure databases

ProteinModelPortaliQ5N3S0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269084.syc0860_c.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD79050; BAD79050; syc0860_c.
KEGGisyc:syc0860_c.
PATRICi32487470. VBISynElo117686_1003.

Phylogenomic databases

eggNOGiCOG2094.
HOGENOMiHOG000224224.
KOiK03652.
OMAiDEACHAW.
OrthoDBiEOG6Q2SQ1.

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-876-MONOMER.

Family and domain databases

Gene3Di3.10.300.10. 1 hit.
HAMAPiMF_00527. 3MGH.
InterProiIPR011034. Formyl_transferase_C-like.
IPR003180. PurDNA_glycsylse.
[Graphical view]
PANTHERiPTHR10429. PTHR10429. 1 hit.
PfamiPF02245. Pur_DNA_glyco. 1 hit.
[Graphical view]
SUPFAMiSSF50486. SSF50486. 1 hit.
TIGRFAMsiTIGR00567. 3mg. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
    Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
    Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1.

Entry informationi

Entry namei3MGH_SYNP6
AccessioniPrimary (citable) accession number: Q5N3S0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: February 1, 2005
Last modified: May 27, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.