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Q5N3S0 (3MGH_SYNP6) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative 3-methyladenine DNA glycosylase

EC=3.2.2.-
Gene names
Ordered Locus Names:syc0860_c
OrganismSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) [Complete proteome] [HAMAP]
Taxonomic identifier269084 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus

Protein attributes

Sequence length199 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the DNA glycosylase MPG family.

Ontologies

Keywords
   Biological processDNA damage
DNA repair
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbase-excision repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

alkylbase DNA N-glycosylase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 199199Putative 3-methyladenine DNA glycosylase HAMAP-Rule MF_00527
PRO_0000265063

Sequences

Sequence LengthMass (Da)Tools
Q5N3S0 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 1DB04C802F5867A2

FASTA19921,927
        10         20         30         40         50         60 
MTTAALLESP WHPLLSQPAT EAAIALLGCW LVRRFADGRV IRGRIVETEA YEAGDPACHG 

        70         80         90        100        110        120 
YRRQTARNRS MFGPPGQVYV YQIYGRYHCI NLATEAADLA SAVLIRALEF PDTEAIAGAG 

       130        140        150        160        170        180 
PGRLCRFLAI DRQLDGSWLG PTSPLDLEAA DYPLGTLIQT TRIGLTRGVD LPWRWYLAES 

       190 
PAVSRRDRRA EAEQMGVSV 

« Hide

References

[1]"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008231 Genomic DNA. Translation: BAD79050.1.
RefSeqYP_171570.1. NC_006576.1.

3D structure databases

ProteinModelPortalQ5N3S0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269084.syc0860_c.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD79050; BAD79050; syc0860_c.
GeneID3199918.
KEGGsyc:syc0860_c.
PATRIC32487470. VBISynElo117686_1003.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2094.
HOGENOMHOG000224224.
KOK03652.
OMAGHAYVRL.
OrthoDBEOG6Q2SQ1.
ProtClustDBCLSK521282.

Enzyme and pathway databases

BioCycSELO269084:GCDQ-876-MONOMER.

Family and domain databases

Gene3D3.10.300.10. 1 hit.
HAMAPMF_00527. 3MGH.
InterProIPR011034. Formyl_transferase_C-like.
IPR003180. PurDNA_glycsylse.
[Graphical view]
PANTHERPTHR10429. PTHR10429. 1 hit.
PfamPF02245. Pur_DNA_glyco. 1 hit.
[Graphical view]
SUPFAMSSF50486. SSF50486. 1 hit.
TIGRFAMsTIGR00567. 3mg. 1 hit.
ProtoNetSearch...

Entry information

Entry name3MGH_SYNP6
AccessionPrimary (citable) accession number: Q5N3S0
Entry history
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: February 1, 2005
Last modified: February 19, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families