Q5N3Q5 (Q5N3Q5_SYNP6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Peptidyl-prolyl cis-trans isomerase EMBL BAD79065.1

Gene names

Name:	ppiB EMBL BAD79065.1
Ordered Locus Names:	syc0875_d

Organism

Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) [Complete proteome] [HAMAP]

Taxonomic identifier

269084 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	243 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides By similarity. RuleBase RU004223
Sequence similarities	Belongs to the cyclophilin-type PPIase family. RuleBase RU004223 Contains 1 PPIase cyclophilin-type domain. RuleBase RU003420

Ontologies

Keywords
Molecular function	Isomerase Rotamase RuleBase RU003420
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein folding Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	peptidyl-prolyl cis-trans isomerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5N3Q5 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: 7DF90D1E638DA158	FASTA	243	26,065
	10 20 30 40 50 60 MRSLIQVAAQ GLLIGLVAWG LVACSGSTTS LSAANANPED VGRLYPDIPR LEGNATVVLT 70 80 90 100 110 120 VNNQPIEIEV LGKDAPLTAG NFVDLVSKGV YDGTSFHRVV KEPQPFVVQG GDPQSKDPKV 130 140 150 160 170 180 PAQQLGTGSY QDPNTKQPRY LPLEITPEGA SQPVYSRTLE QASVSRPPKL RHQRGAVAMA 190 200 210 220 230 240 RASFPDSASS QFYIALSDLG FLDGNYAVFG YVRSDMTVVD RIKQGDRIQS AKVTAGLDNL KRP

References

[1]

"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization." Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M. Photosyn. Res. 93:55-67(2007) [PubMed: 17211581] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008231 Genomic DNA. Translation: BAD79065.1.
RefSeq	YP_171585.1. NC_006576.1.
3D structure databases
ProteinModelPortal	Q5N3Q5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5N3Q5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3199637.
GenomeReviews	Gene locus syc0875_d in contig AP008231_GR.
KEGG	syc:syc0875_d.
PATRIC	32487504. VBISynElo117686_1020.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0652.
HOGENOM	HBG610621.
OMA	QPFVVQG.
ProtClustDB	CLSK538483.
Enzyme and pathway databases
BioCyc	SELO269084:SYC0875_D-MONOMER.
Family and domain databases
InterPro	IPR002130. Cyclophilin-like_PPIase_dom. [Graphical view]
Gene3D	G3DSA:2.40.100.10. PPIase_cyclophilin. 1 hit.
KO	K03768.
Pfam	PF00160. Pro_isomerase. 1 hit. [Graphical view]
PRINTS	PR00153. CSAPPISMRASE.
SUPFAM	SSF50891. CSA_PPIase. 1 hit.
PROSITE	PS50072. CSA_PPIASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5N3Q5_SYNP6

Accession

Primary (citable) accession number: Q5N3Q5

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 2005
Last sequence update:	February 1, 2005
Last modified:	January 25, 2012
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)