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Q5N2F7 (Q5N2F7_SYNP6) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length578 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5N2F7 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 28D00B6E00DFDBFC

FASTA57863,858
        10         20         30         40         50         60 
MIARPMVPTA DQLATDDLSL SDRSRFWLAA LEASGQGVAI ADATHPDLIL TYVNSAFKKL 

        70         80         90        100        110        120 
TGYNAAEALG KSCRFLQGSD RAQPGITTLR QAIRNGQACE VVLRNYRKDG SLFWNQLTIA 

       130        140        150        160        170        180 
PITDGQGKVS HYVALQRDIT AFKEQEQALQ RQGIYDEHSG LPKRQLFLDR LNQALAWSQF 

       190        200        210        220        230        240 
SGVPGALLLI DLGLPAHLDG SPSLSPDAEE NLEIIANRLQ AYVRPHETLA HLNHHQFGLL 

       250        260        270        280        290        300 
LLDPDVQLRA EERAHGIQTL IRDRLAGFEG GAHIGIVPLT PETPATVLLQ AAEAAAMTAR 

       310        320        330        340        350        360 
SQQQGHLSLE ASAIVAAPEQ YSRDRDWQQA IAAGELTLAL QPQMGLRNRQ LRGFEVQLRW 

       370        380        390        400        410        420 
QHPQQGTLLA SQLMEHLEQS QHRETVGRWF LDQAGQLLSQ WRNSAQFSGL FALSLLPQQW 

       430        440        450        460        470        480 
KSPSFIHDLR SLLETYQIPP EQLELDLPAQ SLAESAAESW DWVYAVRDLG IGIGLADFGS 

       490        500        510        520        530        540 
RSIGLYDLRN LPLTTLKLER RFVRGLPDDA NDRAIVRGVV AMSQALKVRI VARGVDTVDQ 

       550        560        570 
AKFLARAECD AMQGLAYSAP LTIEEALQVA RSPQAPAW 

« Hide

References

[1]"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008231 Genomic DNA. Translation: BAD79513.1.
RefSeqYP_172033.1. NC_006576.1.

3D structure databases

ProteinModelPortalQ5N2F7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269084.syc1323_c.

Protocols and materials databases

DNASU3199688.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD79513; BAD79513; syc1323_c.
GeneID3199688.
KEGGsyc:syc1323_c.
PATRIC32488535. VBISynElo117686_1524.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
OMATEERFAT.
OrthoDBEOG6N94DD.
ProtClustDBCLSK743726.

Enzyme and pathway databases

BioCycSELO269084:GCDQ-1352-MONOMER.

Family and domain databases

Gene3D3.20.20.450. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR000160. GGDEF_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
[Graphical view]
PfamPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5N2F7_SYNP6
AccessionPrimary (citable) accession number: Q5N2F7
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: April 16, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)