Q5N213 (Q5N213_SYNP6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Dethiobiotin synthase EMBL BAD79657.1

Gene names

Name:	bioD EMBL BAD79657.1
Ordered Locus Names:	syc1467_c

Organism

Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) [Complete proteome] [HAMAP]

Taxonomic identifier

269084 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	210 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + 7,8-diaminononanoate + CO2 = ADP + phosphate + dethiobiotin. SAAS SAAS004472
Cofactor	Magnesium By similarity. SAAS SAAS004472
Pathway	Cofactor biosynthesis; biotin biosynthesis; biotin from 7,8-diaminononanoate: step 1/2. SAAS SAAS004472

Ontologies

Keywords
Biological process	Biotin biosynthesis SAAS SAAS004472
Ligand	ATP-binding SAAS SAAS004472 Magnesium SAAS SAAS004472 Nucleotide-binding
Molecular function	Ligase SAAS SAAS004472
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	biotin biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW dethiobiotin synthase activity Inferred from electronic annotation. Source: InterPro magnesium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5N213 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: B2C5A79A5A261191	FASTA	210	22,601
	10 20 30 40 50 60 MPQFAFPDRF FVTGTDTDVG KTVVSALLAA GLGASYWKPV QCGLEGLGGD RDRVAAWAGL 70 80 90 100 110 120 TPDRVIPERY RLEAPLSPHL ASRLEQVQIN LQDFQLPEVS GSLIVEGAGG LLVPLNEQDL 130 140 150 160 170 180 ILDLIRQLQL PVVLVARSKL GTINHTLLSI AALRAAEVPI LGVIVNGPRN PENCAAIAHY 190 200 210 GQVPILAELE PLPALNPQVL KDTFNQLFHA

References

[1]

"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization." Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M. Photosyn. Res. 93:55-67(2007) [PubMed: 17211581] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008231 Genomic DNA. Translation: BAD79657.1.
RefSeq	YP_172177.1. NC_006576.1.
3D structure databases
ProteinModelPortal	Q5N213.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5N213.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3198728.
GenomeReviews	Gene locus syc1467_c in contig AP008231_GR.
KEGG	syc:syc1467_c.
PATRIC	32488879. VBISynElo117686_1692.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0132.
HOGENOM	HBG650065.
OMA	WKPIQSG.
PhylomeDB	Q5N213.
ProtClustDB	CLSK743762.
Enzyme and pathway databases
BioCyc	SELO269084:SYC1467_C-MONOMER.
Family and domain databases
HAMAP	MF_00336. BioD. [Tree]
InterPro	IPR004472. DTB_synth_BioD. [Graphical view]
KO	K01935.
PIRSF	PIRSF006755. DTB_synth. 1 hit.
TIGRFAMs	TIGR00347. BioD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5N213_SYNP6

Accession

Primary (citable) accession number: Q5N213

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 2005
Last sequence update:	February 1, 2005
Last modified:	December 14, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)