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Protein
Submitted name:

Uncharacterized protein

Gene

syc1588_d

Organism
Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. signal transducer activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-1630-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:syc1588_dImported
OrganismiSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)Imported
Taxonomic identifieri269084 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001175 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269084.syc1588_d.

Structurei

3D structure databases

ProteinModelPortaliQ5N1P2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5001.
HOGENOMiHOG000130587.
OMAiRTEISAQ.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR007895. MASE1.
IPR029787. Nucleotide_cyclase.
IPR000014. PAS.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF05231. MASE1. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5N1P2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWPGIFIGDF LLKLMTGLGV GVSLSGAVAN ASSRLVAYAV AKRAISRSSR
60 70 80 90 100
LQTLDEVWTL LAAAVAQATV SALIGATGNC LFGAASWNRF FTIGWTWWTG
110 120 130 140 150
NASSAILFFP VVLLWCNQWR QSLQLSAKRW LELFIISAII LAIATLAFAS
160 170 180 190 200
KPYPVSSLVI PVFVWLALRF NSTWVSTGIT FITLFAFIST ANGKGQFSVL
210 220 230 240 250
AVNEALILLQ SYNSSIAVMS FSLNAVISQA RNSQTYLRQI LDHLPIGVAV
260 270 280 290 300
HELTGRMTYV NAVGREILRG KYKSATLEEM AKFFNIYQAS KNRLTPIEEL
310 320 330 340 350
PLAMALQGQL SHTEDLELRW PDRTIPLEVW GIPIHDETGH IKEGMTVFQD
360 370 380 390 400
IHERLENARL IQQANEQLSL TVQELEAANH KLEQEASERQ QAQAQLWHLA
410 420 430 440 450
HFDTLTQLPN RAYFVEQLHA WFNRYKADHQ YPFAVLFLDC DRFKIVNDSL
460 470 480 490 500
GHSAGDVLLT QVAQRLQSCI ASPVIFARLG GDEFGVLVPA QDPGYPQDLA
510 520 530 540 550
EQLHELIVHP FEIQGQRIYI GVSIGISFVS AQIDAAEELL RSADTAMYAA
560 570 580 590 600
KRNPLSRGIQ IFSAKLSANS LKNLALETAL REAIKQADID LFYQPIVDLE
610 620 630 640 650
TGALVGAEAL ARWFHPELGN IPPLEFVTLA ERSKLIFSLG NFILEKACLQ
660 670 680 690 700
IHLWQQDHLI TPGDFILHVN ISAQQICHED FEDWIKDILQ RTEISAQNLM
710 720 730 740 750
LEITESSVAE DIDQQLLKLL DELKSMGVQL SIDDFGTGYS SLSYLQRLPV
760 770 780 790 800
NSLKIDRSFI HQINLAGDNR QVAQATIALA HSFGLEVVAE GIEEESQLYW
810 820 830
LRQLGCDMGQ GYYFSKPLSA ADMTEFLRCH GSASQTR
Length:837
Mass (Da):93,347
Last modified:January 31, 2005 - v1
Checksum:i5E20446932AC5A74
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD79778.1.
RefSeqiYP_172298.1. NC_006576.1.

Genome annotation databases

EnsemblBacteriaiBAD79778; BAD79778; syc1588_d.
KEGGisyc:syc1588_d.
PATRICi32489159. VBISynElo117686_1824.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD79778.1.
RefSeqiYP_172298.1. NC_006576.1.

3D structure databases

ProteinModelPortaliQ5N1P2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269084.syc1588_d.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD79778; BAD79778; syc1588_d.
KEGGisyc:syc1588_d.
PATRICi32489159. VBISynElo117686_1824.

Phylogenomic databases

eggNOGiCOG5001.
HOGENOMiHOG000130587.
OMAiRTEISAQ.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-1630-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR007895. MASE1.
IPR029787. Nucleotide_cyclase.
IPR000014. PAS.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF05231. MASE1. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
    Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
    Photosyn. Res. 93:55-67(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1Imported.

Entry informationi

Entry nameiQ5N1P2_SYNP6
AccessioniPrimary (citable) accession number: Q5N1P2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 31, 2005
Last sequence update: January 31, 2005
Last modified: March 31, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.