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Q5N1P2 (Q5N1P2_SYNP6) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length837 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5N1P2 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 5E20446932AC5A74

FASTA83793,347
        10         20         30         40         50         60 
MWPGIFIGDF LLKLMTGLGV GVSLSGAVAN ASSRLVAYAV AKRAISRSSR LQTLDEVWTL 

        70         80         90        100        110        120 
LAAAVAQATV SALIGATGNC LFGAASWNRF FTIGWTWWTG NASSAILFFP VVLLWCNQWR 

       130        140        150        160        170        180 
QSLQLSAKRW LELFIISAII LAIATLAFAS KPYPVSSLVI PVFVWLALRF NSTWVSTGIT 

       190        200        210        220        230        240 
FITLFAFIST ANGKGQFSVL AVNEALILLQ SYNSSIAVMS FSLNAVISQA RNSQTYLRQI 

       250        260        270        280        290        300 
LDHLPIGVAV HELTGRMTYV NAVGREILRG KYKSATLEEM AKFFNIYQAS KNRLTPIEEL 

       310        320        330        340        350        360 
PLAMALQGQL SHTEDLELRW PDRTIPLEVW GIPIHDETGH IKEGMTVFQD IHERLENARL 

       370        380        390        400        410        420 
IQQANEQLSL TVQELEAANH KLEQEASERQ QAQAQLWHLA HFDTLTQLPN RAYFVEQLHA 

       430        440        450        460        470        480 
WFNRYKADHQ YPFAVLFLDC DRFKIVNDSL GHSAGDVLLT QVAQRLQSCI ASPVIFARLG 

       490        500        510        520        530        540 
GDEFGVLVPA QDPGYPQDLA EQLHELIVHP FEIQGQRIYI GVSIGISFVS AQIDAAEELL 

       550        560        570        580        590        600 
RSADTAMYAA KRNPLSRGIQ IFSAKLSANS LKNLALETAL REAIKQADID LFYQPIVDLE 

       610        620        630        640        650        660 
TGALVGAEAL ARWFHPELGN IPPLEFVTLA ERSKLIFSLG NFILEKACLQ IHLWQQDHLI 

       670        680        690        700        710        720 
TPGDFILHVN ISAQQICHED FEDWIKDILQ RTEISAQNLM LEITESSVAE DIDQQLLKLL 

       730        740        750        760        770        780 
DELKSMGVQL SIDDFGTGYS SLSYLQRLPV NSLKIDRSFI HQINLAGDNR QVAQATIALA 

       790        800        810        820        830 
HSFGLEVVAE GIEEESQLYW LRQLGCDMGQ GYYFSKPLSA ADMTEFLRCH GSASQTR 

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References

[1]"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008231 Genomic DNA. Translation: BAD79778.1.
RefSeqYP_172298.1. NC_006576.1.

3D structure databases

ProteinModelPortalQ5N1P2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269084.syc1588_d.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD79778; BAD79778; syc1588_d.
GeneID3198264.
KEGGsyc:syc1588_d.
PATRIC32489159. VBISynElo117686_1824.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5001.
HOGENOMHOG000130587.
OMARTEISAQ.
OrthoDBEOG69GZGV.

Enzyme and pathway databases

BioCycSELO269084:GCDQ-1630-MONOMER.

Family and domain databases

Gene3D3.20.20.450. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR000160. GGDEF_dom.
IPR007895. MASE1.
IPR000014. PAS.
[Graphical view]
PfamPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF05231. MASE1. 1 hit.
[Graphical view]
SMARTSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00254. GGDEF. 1 hit.
PROSITEPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5N1P2_SYNP6
AccessionPrimary (citable) accession number: Q5N1P2
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)