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Protein
Submitted name:

Uncharacterized protein

Gene

syc2235_c

Organism
Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphorelay sensor kinase activity Source: InterPro

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-2291-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:syc2235_cImported
OrganismiSynechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans)Imported
Taxonomic identifieri269084 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
ProteomesiUP000001175: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi269084.syc2235_c.

Structurei

3D structure databases

ProteinModelPortaliQ5MZU5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
OMAiLENNTEG.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 3 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 2 hits.
PS50112. PAS. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5MZU5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSPLQPFLE PANVQQLAGE ALTWLFTPAG QLLLASPSAQ QLSLLSDPNT
60 70 80 90 100
LSIPSWLQQV IEKVLASNHL DQNLEPQVEQ LRVALATEVV HIPLTLELQW
110 120 130 140 150
LADVESEASF LLVTGSCQDS HQNLFLDWQQ LQSLEVQRLS HKVGHWSWNR
160 170 180 190 200
SQADEFLAPP HIYTQIGRSL HEPFTLTSFL QHCHSSLESL QANAISLGNQ
210 220 230 240 250
RSHYLWDFPV KTAHSDRWFE CHCLLHHDET GELLSLVGNI RDITEEHHIL
260 270 280 290 300
SLVQDSETRF QVLIESNPNG ILVLDEQGAV LFANHVAEQV FDQSLSELQG
310 320 330 340 350
KYLGLPLTLN VTVQLDLVQP DGSLRYVEVS IVPIPWQQSK AYLALLTDIT
360 370 380 390 400
SLQQTQQRLK LLQEATENSP ASILITSAEG IIEYVNPAFE LMTGYGADEV
410 420 430 440 450
IGKNPRFLKS GLMSPSFYQD LWETITAGET WRGELYNRRK TGELFWDRTS
460 470 480 490 500
ISPVKDLAGQ IIHFVAVKED ITEQKRNREL LDHQANYDSL TDLPNRSLAL
510 520 530 540 550
DRLRQATALS ERSNDTVIVM LLDLDRFKNI NDTLGHSYGD CLLQEIAKRL
560 570 580 590 600
RYHLPREITI SRLGGDEFLI ICPAVKENIH LEKLSQQLLK IISQPITIEA
610 620 630 640 650
EELVITASIG VACYPNDGVT PEVLMRNADT AMYSAKRNGG NDFQLFMPTM
660 670 680 690 700
NAEAHARIQL ETHLRHALEQ YQLKVFYQPI ISLQDNHVVG LEALARWHDP
710 720 730 740 750
ELGNIPPDRF IPIAEETGLI IPLGYRVIEQ ACQDVAIWQQ KYNYPFWVAV
760 770 780 790 800
NLSPRQLRSN RFTQITAKIL QRHNFRPNYL KLEVTEQMLL DNTSTIAQML
810 820 830 840 850
DTLHRKGIAL ALDDFGTGYS ALSYLRRYPF QSLKVDQSFL RDIPHSTESC
860 870 880 890 900
ALVKTIVAMA HGLGMQAVAE GVETAEQVEF LKAIGCEYGQ GYWFSRPLPA
910
VEIDSFLAVS TGHESIS
Length:917
Mass (Da):103,566
Last modified:February 1, 2005 - v1
Checksum:i15F41C319D2659B5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD80425.1.
RefSeqiYP_172945.1. NC_006576.1.

Genome annotation databases

EnsemblBacteriaiBAD80425; BAD80425; syc2235_c.
GeneIDi3198565.
KEGGisyc:syc2235_c.
PATRICi32490624. VBISynElo117686_2542.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008231 Genomic DNA. Translation: BAD80425.1.
RefSeqiYP_172945.1. NC_006576.1.

3D structure databases

ProteinModelPortaliQ5MZU5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi269084.syc2235_c.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD80425; BAD80425; syc2235_c.
GeneIDi3198565.
KEGGisyc:syc2235_c.
PATRICi32490624. VBISynElo117686_2542.

Phylogenomic databases

eggNOGiCOG2202.
OMAiLENNTEG.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciSELO269084:GCDQ-2291-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00086. PAC. 3 hits.
SM00091. PAS. 2 hits.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 2 hits.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 3 hits.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50113. PAC. 2 hits.
PS50112. PAS. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
    Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
    Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1Imported.

Entry informationi

Entry nameiQ5MZU5_SYNP6
AccessioniPrimary (citable) accession number: Q5MZU5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: March 4, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.