Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q5MZF8 (Q5MZF8_SYNP6) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length475 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH. RuleBase RU004446

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. RuleBase RU004446

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Sequences

Sequence LengthMass (Da)Tools
Q5MZF8 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 28B338A22905C8FC

FASTA47552,233
        10         20         30         40         50         60 
MYEKIQPPSE GSKIRFEAGK PIVPDNPIIP FIRGDGAGVD IWPATERVLD AAVAKAYGGQ 

        70         80         90        100        110        120 
RKITWFKVYA GDEACDLYGT YQYLPEDTLT AIREYGVAIK GPLTTPIGGG IRSLNVALRQ 

       130        140        150        160        170        180 
IFDLYACVRP CRYYTGTPSP HRTPEQLDVV VYRENTEDIY LGIEWKQGDP TGDRLIKLLN 

       190        200        210        220        230        240 
EDFIPNSPSL GKKQIRLDSG IGIKPISKTG SQRLIRRAIE HALRLEGRKR HVTLVHKGNI 

       250        260        270        280        290        300 
MKFTEGAFRD WGYELATTEF RTDCVTERES WILANQESKP DLSLEDNARL IEPGYDAMTP 

       310        320        330        340        350        360 
EKQAAVVAEV KAVLDSIGAT HGNGQWKSKV LVDDRIADSI FQQIQTRPGE YSVLATMNLN 

       370        380        390        400        410        420 
GDYISDAAAA VVGGLGMAPG ANIGDEAAIF EATHGAAPKH AGLDRINPGS VILSGVMMLE 

       430        440        450        460        470 
YLGWQEAADL ITKGISQAIA NREVTYDLAR LMEPAVDQPL KCSEFAEAIV KHFDD 

« Hide

References

[1]"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization."
Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M.
Photosyn. Res. 93:55-67(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27144 / PCC 6301 / SAUG 1402/1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008231 Genomic DNA. Translation: BAD80562.1.
RefSeqYP_173082.1. NC_006576.1.

3D structure databases

ProteinModelPortalQ5MZF8.
SMRQ5MZF8. Positions 4-473.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING269084.syc2372_d.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAD80562; BAD80562; syc2372_d.
GeneID3198034.
KEGGsyc:syc2372_d.
PATRIC32490936. VBISynElo117686_2698.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0538.
HOGENOMHOG000021113.
KOK00031.
OMACLRPIRY.
OrthoDBEOG6SNDTP.

Enzyme and pathway databases

BioCycSELO269084:GCDQ-2428-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 2 hits.
InterProIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR004439. Isocitrate_DH_NADP_dimer_prok.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERPTHR11835. PTHR11835. 1 hit.
PfamPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsTIGR00183. prok_nadp_idh. 1 hit.
PROSITEPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5MZF8_SYNP6
AccessionPrimary (citable) accession number: Q5MZF8
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: May 14, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)