Q5MZF1 (Q5MZF1_SYNP6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAD80569.1

Gene names

Ordered Locus Names:

syc2379_c

Organism

Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (Anacystis nidulans) [Complete proteome] [HAMAP]

Taxonomic identifier

269084 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Chroococcales › Synechococcus

Protein attributes

Sequence length	121 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 2NVN Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5MZF1 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: B961A2FF57AAED8F	FASTA	121	13,322
	10 20 30 40 50 60 MGRILREGAG WRLGWDETAH RYPGLVGTTD WAVELTAAEM ADFCRLVQQL AETIAAIAPE 70 80 90 100 110 120 LMPEERLQIE AESALLWLEA EGFADAYELR LILASDRRVE ACWPAAAVPA LVAATHTLKG F

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete nucleotide sequence of the freshwater unicellular cyanobacterium Synechococcus elongatus PCC 6301 chromosome: gene content and organization." Sugita C., Ogata K., Shikata M., Jikuya H., Takano J., Furumichi M., Kanehisa M., Omata T., Sugiura M., Sugita M. Photosyn. Res. 93:55-67(2007) [PubMed: 17211581] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	"Crystal structure of hypothetical protein (YP_400729.1) from Synechococcus SP. PCC 7942 (Elongatus) at 2.50 A resolution." Joint Center for Structural Genomics (JCSG) Submitted (NOV-2006) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AP008231 Genomic DNA. Translation: BAD80569.1.

RefSeq

YP_173089.1. NC_006576.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2NVN	X-ray	2.50	A	1-121	[»]

ProteinModelPortal

Q5MZF1.

SMR

Q5MZF1. Positions 1-121.

ModBase

Search...

Protein-protein interaction databases

STRING

Q5MZF1.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

GeneID

3198086.

GenomeReviews

Gene locus syc2379_c in contig AP008231_GR.

KEGG

syc:syc2379_c.

PATRIC

32490952. VBISynElo117686_2706.

Organism-specific databases

CMR

Search...

Phylogenomic databases

eggNOG

NOG13612.

HOGENOM

HBG635425.

OMA

QEGPGWR.

PhylomeDB

Q5MZF1.

ProtClustDB

CLSK892503.

Enzyme and pathway databases

BioCyc

SELO269084:SYC2379_C-MONOMER.

Family and domain databases

InterPro

IPR014947. DUF1818.
IPR009044. ssDNA-bd_transcriptional_reg.
[Graphical view]

Gene3D

G3DSA:2.30.31.10. ssDNA-bd_transcriptional_reg. 1 hit.

Pfam

PF08848. DUF1818. 1 hit.
[Graphical view]

SUPFAM

SSF54447. ssDNA_bind_regul. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q5MZF1_SYNP6

Accession

Primary (citable) accession number: Q5MZF1

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 2005
Last sequence update:	February 1, 2005
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)