Q5M9N3 (Q5M9N3_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Splicing factor, arginine/serine-rich 6b EMBL AAH86820.1

Gene names

Name:	srsf6b ZFIN ZDB-GENE-041219-1
Synonyms:	sfrs6 ZFIN ZDB-GENE-041219-1, sfrs6b ZFIN ZDB-GENE-041219-1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH86820.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	355 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5M9N3 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: 54892E0AE1A0AC94	FASTA	355	41,213
	10 20 30 40 50 60 MPRVYIGKLS YHVREKDIQR FFGGYGKLME TDLKNGYGFV EFEDTRDADD AVYELNGKEL 70 80 90 100 110 120 CGERVIVEHA RGPRRDRDGY GGGYGGFGGR SNSGYSSRSR SGRDKYGPPV RTEYRLIVEN 130 140 150 160 170 180 LSSRCSWQDL KDFMRQAGEV TYADAHKERT NEGVIEFRSH SDMRRALDKL DVTDINGRKI 190 200 210 220 230 240 RLVEDKPRRR RSYSASRSRS RSRRRSRSRS RRSSRSQSRS RSRSRSRSKH SRSRSGRKYR 250 260 270 280 290 300 SRSRSSRKSH SKSHSKKSRS RSRSRTEKSR SRSRSRSKAK SERDSRSRSR EKSTSRKSRS 310 320 330 340 350 RSASPRENGD GERVKSTSRS PSPKENRHQL ESPRKRSASR SRSKSRSRSR SASQD

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Ovary EMBL AAH86820.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC086820 mRNA. Translation: AAH86820.1.
IPI	IPI00502132.
RefSeq	NP_001008732.1. NM_001008732.1.
UniGene	Dr.76948.
3D structure databases
ProteinModelPortal	Q5M9N3.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5M9N3.
Proteomic databases
PRIDE	Q5M9N3.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	494133.
KEGG	dre:494133.
Organism-specific databases
CTD	494133.
ZFIN	ZDB-GENE-041219-1. srsf6b.
Phylogenomic databases
HOVERGEN	HBG002295.
InParanoid	Q5M9N3.
KO	K12893.
Gene expression databases
ArrayExpress	Q5M9N3.
Bgee	Q5M9N3.
Family and domain databases
Gene3D	3.30.70.330. 2 hits.
InterPro	IPR012677. Nucleotide-bd_a/b_plait. IPR000504. RRM_dom. [Graphical view]
Pfam	PF00076. RRM_1. 2 hits. [Graphical view]
SMART	SM00360. RRM. 2 hits. [Graphical view]
PROSITE	PS50102. RRM. 2 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	20865634.

Entry information

Entry name

Q5M9N3_DANRE

Accession

Primary (citable) accession number: Q5M9N3

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 2005
Last sequence update:	February 1, 2005
Last modified:	March 6, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)