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Protein
Submitted name:

MCG23455, isoform CRA_e

Gene

Rpl13a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
MCG23455, isoform CRA_eImported
Submitted name:
Ribosomal protein L13AImported
Submitted name:
Rpl13a proteinImported
Gene namesi
Name:Rpl13aImported
ORF Names:mCG_23455Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1351455. Rpl13a.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSMUSG00000074129.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000115722.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L13P family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3204. Eukaryota.
COG0102. LUCA.
HOVERGENiHBG062176.
KOiK02872.
OMAiYYERKKV.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiIPR005822. Ribosomal_L13.
IPR023563. Ribosomal_L13_CS.
IPR005755. Ribosomal_L13_euk/arc.
[Graphical view]
PANTHERiPTHR11545. PTHR11545. 1 hit.
PTHR11545:SF3. PTHR11545:SF3. 1 hit.
PfamiPF00572. Ribosomal_L13. 1 hit.
[Graphical view]
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01077. L13_A_E. 1 hit.
PROSITEiPS00783. RIBOSOMAL_L13. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5M9M0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEGQVLVLD GRGHLLGRLA AIVAKQVLLG RKVVVVRCEG INISGNFYRN
60 70 80 90 100
KLKYLAFLRK RMNTNPSRGP YHFRAPSRIF WRTVRGMLPH KTKRGQAALE
110 120 130 140 150
RLKVLDGIPP PYDKKKRMVV PAALKVVRLK PTRKFAYLGR LAHEVGWKYQ
160 170 180 190 200
AVTATLEEKR KEKAKMHYRK KKQILRLRKQ AEKNVEKKIC KFTEVLKTNG

LLV
Length:203
Mass (Da):23,464
Last modified:May 10, 2005 - v1
Checksum:i967AEAE3362E02CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC086896 mRNA. Translation: AAH86896.1.
AK007609 mRNA. Translation: BAB25132.1.
AK146318 mRNA. Translation: BAE27073.1.
AK156035 mRNA. Translation: BAE33555.1.
AK168784 mRNA. Translation: BAE40618.1.
AK168903 mRNA. Translation: BAE40717.1.
CT010169 mRNA. Translation: CAJ18377.1.
CH466603 Genomic DNA. Translation: EDL22806.1.
RefSeqiNP_033464.2. NM_009438.5.
UniGeneiMm.180458.

Genome annotation databases

GeneIDi22121.
KEGGimmu:22121.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC086896 mRNA. Translation: AAH86896.1.
AK007609 mRNA. Translation: BAB25132.1.
AK146318 mRNA. Translation: BAE27073.1.
AK156035 mRNA. Translation: BAE33555.1.
AK168784 mRNA. Translation: BAE40618.1.
AK168903 mRNA. Translation: BAE40717.1.
CT010169 mRNA. Translation: CAJ18377.1.
CH466603 Genomic DNA. Translation: EDL22806.1.
RefSeqiNP_033464.2. NM_009438.5.
UniGeneiMm.180458.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000115722.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi22121.
KEGGimmu:22121.

Organism-specific databases

CTDi23521.
MGIiMGI:1351455. Rpl13a.

Phylogenomic databases

eggNOGiKOG3204. Eukaryota.
COG0102. LUCA.
HOVERGENiHBG062176.
KOiK02872.
OMAiYYERKKV.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000074129.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiIPR005822. Ribosomal_L13.
IPR023563. Ribosomal_L13_CS.
IPR005755. Ribosomal_L13_euk/arc.
[Graphical view]
PANTHERiPTHR11545. PTHR11545. 1 hit.
PTHR11545:SF3. PTHR11545:SF3. 1 hit.
PfamiPF00572. Ribosomal_L13. 1 hit.
[Graphical view]
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01077. L13_A_E. 1 hit.
PROSITEiPS00783. RIBOSOMAL_L13. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ5M9M0_MOUSE
AccessioniPrimary (citable) accession number: Q5M9M0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: November 30, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.