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Protein

RRP15-like protein

Gene

Rrp15

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
RRP15-like protein
Alternative name(s):
Ribosomal RNA-processing protein 15
Gene namesi
Name:Rrp15
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 13

Organism-specific databases

RGDi1306106. Rrp15.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 280279RRP15-like proteinPRO_0000273215Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanineBy similarity
Modified residuei9 – 91CitrullineBy similarity
Modified residuei58 – 581PhosphoserineBy similarity
Modified residuei67 – 671PhosphoserineBy similarity
Modified residuei104 – 1041PhosphothreonineBy similarity
Modified residuei206 – 2061PhosphoserineBy similarity
Cross-linki238 – 238Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1)By similarity
Cross-linki238 – 238Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Modified residuei265 – 2651PhosphoserineCombined sources
Modified residuei279 – 2791PhosphoserineBy similarity

Post-translational modificationi

Citrullinated by PADI4.By similarity

Keywords - PTMi

Acetylation, Citrullination, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiQ5M947.
PRIDEiQ5M947.

PTM databases

iPTMnetiQ5M947.

Expressioni

Gene expression databases

GenevisibleiQ5M947. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000003359.

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili21 – 4525Sequence analysisAdd
BLAST
Coiled coili107 – 14337Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the RRP15 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG2974. Eukaryota.
ENOG4111R78. LUCA.
GeneTreeiENSGT00390000001960.
HOGENOMiHOG000047445.
HOVERGENiHBG056607.
InParanoidiQ5M947.
OMAiGTNMGWA.
OrthoDBiEOG73V6MV.
PhylomeDBiQ5M947.
TreeFamiTF106119.

Family and domain databases

InterProiIPR012459. Rrp15.
[Graphical view]
PANTHERiPTHR13245. PTHR13245. 1 hit.
PfamiPF07890. Rrp15p. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5M947-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAAVQDSRV NPGGKLKRSP KKKKKMKKVA KAAVSKLEDE LKDSSGGEGS
60 70 80 90 100
CESEMDDSDD GAAEADSEDN VESCEEENEV AAESSAGTNS GWADAMAKIL
110 120 130 140 150
NKKTPKSKPT ILTKNKELEK EKEKLKQERL EKRKQIDKKR EWEMLCRVKP
160 170 180 190 200
DVIKDKEAER NLQRIATRGV VQLFNAVQKH QRNVDEKVKE VGGSIRKRAK
210 220 230 240 250
LMSTVSKKDF ISVLRGMDGA SENSSAGKSP KARQTEVKSE EGPGWKILRD
260 270 280
DFMMGASMKD WDKESEGEEP ADGQAGSASH
Length:280
Mass (Da):30,926
Last modified:February 1, 2005 - v1
Checksum:iBB79E8042006459A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC087649 mRNA. Translation: AAH87649.1.
RefSeqiNP_001009702.1. NM_001009702.1.
UniGeneiRn.137835.

Genome annotation databases

EnsembliENSRNOT00000003359; ENSRNOP00000003359; ENSRNOG00000002450.
GeneIDi360895.
KEGGirno:360895.
UCSCiRGD:1306106. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC087649 mRNA. Translation: AAH87649.1.
RefSeqiNP_001009702.1. NM_001009702.1.
UniGeneiRn.137835.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000003359.

PTM databases

iPTMnetiQ5M947.

Proteomic databases

PaxDbiQ5M947.
PRIDEiQ5M947.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000003359; ENSRNOP00000003359; ENSRNOG00000002450.
GeneIDi360895.
KEGGirno:360895.
UCSCiRGD:1306106. rat.

Organism-specific databases

CTDi51018.
RGDi1306106. Rrp15.

Phylogenomic databases

eggNOGiKOG2974. Eukaryota.
ENOG4111R78. LUCA.
GeneTreeiENSGT00390000001960.
HOGENOMiHOG000047445.
HOVERGENiHBG056607.
InParanoidiQ5M947.
OMAiGTNMGWA.
OrthoDBiEOG73V6MV.
PhylomeDBiQ5M947.
TreeFamiTF106119.

Miscellaneous databases

PROiQ5M947.

Gene expression databases

GenevisibleiQ5M947. RN.

Family and domain databases

InterProiIPR012459. Rrp15.
[Graphical view]
PANTHERiPTHR13245. PTHR13245. 1 hit.
PfamiPF07890. Rrp15p. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Ovary.
  2. "Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues."
    Lundby A., Secher A., Lage K., Nordsborg N.B., Dmytriyev A., Lundby C., Olsen J.V.
    Nat. Commun. 3:876-876(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-265, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiRRP15_RAT
AccessioniPrimary (citable) accession number: Q5M947
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: February 1, 2005
Last modified: July 6, 2016
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.