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Protein

39S ribosomal protein L16, mitochondrial

Gene

Mrpl16

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-5389840 Mitochondrial translation elongation
R-RNO-5419276 Mitochondrial translation termination

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L16, mitochondrial
Short name:
L16mt
Short name:
MRP-L16
Gene namesi
Name:Mrpl16
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi735195 Mrpl16

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 29MitochondrionBy similarityAdd BLAST29
ChainiPRO_000023984430 – 25139S ribosomal protein L16, mitochondrialAdd BLAST222

Proteomic databases

PaxDbiQ5M818
PRIDEiQ5M818

PTM databases

iPTMnetiQ5M818
PhosphoSitePlusiQ5M818

Expressioni

Gene expression databases

BgeeiENSRNOG00000021005
GenevisibleiQ5M818 RN

Interactioni

Subunit structurei

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000028517

Structurei

3D structure databases

ProteinModelPortaliQ5M818
SMRiQ5M818
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3422 Eukaryota
COG0197 LUCA
GeneTreeiENSGT00390000002038
HOGENOMiHOG000021349
HOVERGENiHBG056553
InParanoidiQ5M818
KOiK02878
OMAiMFAIWRV
OrthoDBiEOG091G0KF0
PhylomeDBiQ5M818
TreeFamiTF312969

Family and domain databases

CDDicd01433 Ribosomal_L16_L10e, 1 hit
Gene3Di3.90.1170.10, 1 hit
InterProiView protein in InterPro
IPR016180 Ribosomal_L10e/L16
IPR036920 Ribosomal_L10e/L16_sf
IPR000114 Ribosomal_L16
PANTHERiPTHR12220 PTHR12220, 2 hits
PfamiView protein in Pfam
PF00252 Ribosomal_L16, 1 hit
PRINTSiPR00060 RIBOSOMALL16
SUPFAMiSSF54686 SSF54686, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q5M818-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWRLLTRAPA PLWRMHFSDT WAALPTSAGL KTLLPVPTFE NVSIPERSKL
60 70 80 90 100
KFVERVPLVP KVRREPKNLK DIRGPSAEAT DFTEGNFAIL ALGGGYLHWG
110 120 130 140 150
HFEMMRLTIN RFMDPKNMFA IWRVPAPFKP ITRKGVGQRM GGGKGAIDHY
160 170 180 190 200
VTPVKTGCLI VEMGGRCEFE EVKRVLNQVA HKLPFPAKAV SRKTLEKMHQ
210 220 230 240 250
NQKERELNNQ NPWTFERIAT ANMFGIRKFL SPYDLTQKGR YWGKFYMPKR

V
Length:251
Mass (Da):28,895
Last modified:February 1, 2005 - v1
Checksum:i190E56ADE089CCAE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC088312 mRNA Translation: AAH88312.1
RefSeqiNP_001009647.1, NM_001009647.1
UniGeneiRn.101972

Genome annotation databases

EnsembliENSRNOT00000028517; ENSRNOP00000028517; ENSRNOG00000021005
GeneIDi293754
KEGGirno:293754
UCSCiRGD:735195 rat

Similar proteinsi

Entry informationi

Entry nameiRM16_RAT
AccessioniPrimary (citable) accession number: Q5M818
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 13, 2006
Last sequence update: February 1, 2005
Last modified: May 23, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health