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Protein
Submitted name:

ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1

Gene

Atp6v0d1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-RNO-1222556. ROS, RNS production in response to bacteria.
R-RNO-77387. Insulin receptor recycling.
R-RNO-917977. Transferrin endocytosis and recycling.
R-RNO-983712. Ion channel transport.

Names & Taxonomyi

Protein namesi
Submitted name:
ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1Imported
Submitted name:
Protein Atp6v0d1Imported
Submitted name:
RCG51062, isoform CRA_aImported
Gene namesi
Name:Atp6v0d1Imported
ORF Names:rCG_51062Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 19

Organism-specific databases

RGDi1306159. Atp6v0d1.

Subcellular locationi

GO - Cellular componenti

  • apical plasma membrane Source: RGD
  • axon terminus Source: RGD
  • centrosome Source: Ensembl
  • early endosome Source: GO_Central
  • extracellular exosome Source: Ensembl
  • lysosomal membrane Source: GO_Central
  • neuron projection Source: RGD
  • plasma membrane proton-transporting V-type ATPase complex Source: GO_Central
  • protein complex Source: RGD
  • proton-transporting V-type ATPase, V0 domain Source: InterPro
  • synaptic vesicle Source: RGD
  • vacuolar proton-transporting V-type ATPase complex Source: GO_Central
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiENSRNOG00000017235.

Interactioni

GO - Molecular functioni

  • protein complex binding Source: RGD

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000023606.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG2957. Eukaryota.
COG1527. LUCA.
GeneTreeiENSGT00390000002200.
HOGENOMiHOG000199065.
HOVERGENiHBG018065.
KOiK02146.
OMAiMDFITYS.
OrthoDBiEOG091G09L5.
TreeFamiTF300857.

Family and domain databases

InterProiIPR002843. ATPase_V0-cplx_csu/dsu.
IPR016727. ATPase_V0-cplx_dsu.
[Graphical view]
PANTHERiPTHR11028. PTHR11028. 1 hit.
PfamiPF01992. vATP-synt_AC39. 1 hit.
[Graphical view]
PIRSFiPIRSF018497. V-ATP_synth_D. 1 hit.
SUPFAMiSSF103486. SSF103486. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5M7T6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFFPELYFN VDNGYLEGLV RGLKAGVLSQ ADYLNLVQCE TLEDLKLHLQ
60 70 80 90 100
STDYGNFLAN EASPLTVSVI DDKLKEKMVV EFRHMRNHAY EPLASFLDFI
110 120 130 140 150
TYSYMIDNVI LLITGTLHQR SIAELVPKCH PLGSFEQMEA VNIAQTPAEL
160 170 180 190 200
YNAILVDTPL AAFFQDCISE QDLDEMNIEI IRNTLYKAYL ESFYKFCTLL
210 220 230 240 250
GGTTADAMCP ILEFEADRRA FIITINSFGT ELSKEDRAKL FPHCGRLYPE
260 270 280 290 300
GLAQLARADD YEQVKNVADY YPEYKLLFEG AGSNPGDKTL EDRFFEHEVK
310 320 330 340 350
LNKLAFLNQF HFGVFYAFVK LKEQECRNIV WIAECIAQRH RAKIDNYIPI

F
Length:351
Mass (Da):40,301
Last modified:February 1, 2005 - v1
Checksum:i62CDF67B982124C9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC116220 Genomic DNA. No translation available.
BC088462 mRNA. Translation: AAH88462.1.
CH473972 Genomic DNA. Translation: EDL92381.1.
RefSeqiNP_001011927.1. NM_001011927.1.
UniGeneiRn.94752.

Genome annotation databases

EnsembliENSRNOT00000023606; ENSRNOP00000023606; ENSRNOG00000017235.
GeneIDi291969.
KEGGirno:291969.
UCSCiRGD:1306159. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC116220 Genomic DNA. No translation available.
BC088462 mRNA. Translation: AAH88462.1.
CH473972 Genomic DNA. Translation: EDL92381.1.
RefSeqiNP_001011927.1. NM_001011927.1.
UniGeneiRn.94752.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000023606.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000023606; ENSRNOP00000023606; ENSRNOG00000017235.
GeneIDi291969.
KEGGirno:291969.
UCSCiRGD:1306159. rat.

Organism-specific databases

CTDi9114.
RGDi1306159. Atp6v0d1.

Phylogenomic databases

eggNOGiKOG2957. Eukaryota.
COG1527. LUCA.
GeneTreeiENSGT00390000002200.
HOGENOMiHOG000199065.
HOVERGENiHBG018065.
KOiK02146.
OMAiMDFITYS.
OrthoDBiEOG091G09L5.
TreeFamiTF300857.

Enzyme and pathway databases

ReactomeiR-RNO-1222556. ROS, RNS production in response to bacteria.
R-RNO-77387. Insulin receptor recycling.
R-RNO-917977. Transferrin endocytosis and recycling.
R-RNO-983712. Ion channel transport.

Gene expression databases

BgeeiENSRNOG00000017235.

Family and domain databases

InterProiIPR002843. ATPase_V0-cplx_csu/dsu.
IPR016727. ATPase_V0-cplx_dsu.
[Graphical view]
PANTHERiPTHR11028. PTHR11028. 1 hit.
PfamiPF01992. vATP-synt_AC39. 1 hit.
[Graphical view]
PIRSFiPIRSF018497. V-ATP_synth_D. 1 hit.
SUPFAMiSSF103486. SSF103486. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ5M7T6_RAT
AccessioniPrimary (citable) accession number: Q5M7T6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: November 30, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.