Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alcohol dehydrogenase 1

Gene

adh1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Cofactori

Zn2+UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Metal-bindingUniRule annotation, ZincUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Alcohol dehydrogenase 1Imported
Submitted name:
Alcohol dehydrogenase 7Imported
Gene namesi
Name:adh1Imported
Synonyms:ADH7Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-482968. adh1.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000020503.

Structurei

3D structure databases

SMRiQ5M7K9. Positions 3-376.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the zinc-containing alcohol dehydrogenase family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0022. Eukaryota.
COG1062. LUCA.
HOGENOMiHOG000294674.
HOVERGENiHBG000195.
KOiK13951.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
3.90.180.10. 1 hit.
InterProiIPR013149. ADH_C.
IPR013154. ADH_N.
IPR002085. ADH_SF_Zn-type.
IPR002328. ADH_Zn_CS.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
IPR020843. PKS_ER.
[Graphical view]
PANTHERiPTHR11695. PTHR11695. 2 hits.
PfamiPF08240. ADH_N. 1 hit.
PF00107. ADH_zinc_N. 1 hit.
[Graphical view]
SMARTiSM00829. PKS_ER. 1 hit.
[Graphical view]
SUPFAMiSSF50129. SSF50129. 2 hits.
SSF51735. SSF51735. 1 hit.
PROSITEiPS00059. ADH_ZINC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5M7K9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDTAGKIVKC KAAVAWEIGK PLTIEEIEVE VPKASEVRIK MVATGICRTD
60 70 80 90 100
DHVLKGALKG IDFPVILGHE GAGIIESVGE GVTGLKPGDK VIPLCIPQCG
110 120 130 140 150
KCSSCLNPNT NCCLKTHLSE SQNVMPDKTS RFLCKGKAAY HFLWTSTFSE
160 170 180 190 200
YTVVPVDAVA KIDDRVPMDK ACLFGCGFPT GYGAVVNTAK VEPGSTCAVF
210 220 230 240 250
GLGGIGLSAV IGCKSAGAAI IIAVDINSAK FDIAKVFGAT ECINPLDYSK
260 270 280 290 300
PIQEVITEMT NGGVHYSFEC IGNTDTMKAA LECCHMGYGT SVIIGEAPSA
310 320 330 340 350
AQISFDPILL FTGRTWKGSI FGGWKSKESV PRLVDEFMAN KFNLDGLVSH
360 370
TLPFDQINEG FELLRSGNSI RTILMF
Length:376
Mass (Da):40,077
Last modified:February 1, 2005 - v1
Checksum:i7F3E42D1BF345FB1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC088582 mRNA. Translation: AAH88582.1.
HF569240 Genomic DNA. Translation: CCP94564.1.
RefSeqiNP_001011391.1. NM_001011391.1.
UniGeneiStr.27783.

Genome annotation databases

GeneIDi496861.
KEGGixtr:496861.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC088582 mRNA. Translation: AAH88582.1.
HF569240 Genomic DNA. Translation: CCP94564.1.
RefSeqiNP_001011391.1. NM_001011391.1.
UniGeneiStr.27783.

3D structure databases

SMRiQ5M7K9. Positions 3-376.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000020503.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi496861.
KEGGixtr:496861.

Organism-specific databases

CTDi11522.
XenbaseiXB-GENE-482968. adh1.

Phylogenomic databases

eggNOGiKOG0022. Eukaryota.
COG1062. LUCA.
HOGENOMiHOG000294674.
HOVERGENiHBG000195.
KOiK13951.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
3.90.180.10. 1 hit.
InterProiIPR013149. ADH_C.
IPR013154. ADH_N.
IPR002085. ADH_SF_Zn-type.
IPR002328. ADH_Zn_CS.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
IPR020843. PKS_ER.
[Graphical view]
PANTHERiPTHR11695. PTHR11695. 2 hits.
PfamiPF08240. ADH_N. 1 hit.
PF00107. ADH_zinc_N. 1 hit.
[Graphical view]
SMARTiSM00829. PKS_ER. 1 hit.
[Graphical view]
SUPFAMiSSF50129. SSF50129. 2 hits.
SSF51735. SSF51735. 1 hit.
PROSITEiPS00059. ADH_ZINC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: EmbryoImported.
  2. "The Xenopus alcohol dehydrogenase gene family: characterization and comparative analysis incorporating amphibian and reptilian genomes."
    Borras E., Albalat R., Duester G., Pares X., Farres J.
    BMC Genomics 15:216-216(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ5M7K9_XENTR
AccessioniPrimary (citable) accession number: Q5M7K9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: May 11, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.