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Q5M393 (Q5M393_STRT2) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:amyL EMBL AAV61145.1
Ordered Locus Names:stu1542 EMBL AAV61145.1
OrganismStreptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) [Complete proteome] [HAMAP] EMBL AAV61145.1
Taxonomic identifier264199 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length491 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q5M393 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 6B4075225CBF4E64

FASTA49157,031
        10         20         30         40         50         60 
MSTNKEKTMT NQTAMQYFEW YLPSDGQHWN NLAEDAQHLA DLGISHVWMP PAFKATNKDD 

        70         80         90        100        110        120 
VGYGVYDLFD LGEFDQKGTI RTKYGLKEEY LNAINQLKNV GIIPMADVVL NHKAAADKLE 

       130        140        150        160        170        180 
TFYVVEVDPE DRTKVISEPF EIEGWTHFTF DGRQKAYNDF EWHWYHFNGT DFDAKRNKKG 

       190        200        210        220        230        240 
IYLIQGDNKG WAHNDLVDNE NGNFDYLMFA NLDYRHPEVI ENIYEWADWF VETTGVQGFR 

       250        260        270        280        290        300 
MDAIKHIDYF FMRNFIRDVK EKQGQDFYVF GEFWNAKEED NNTYLEKTEN RFDLVDVRLH 

       310        320        330        340        350        360 
YNLYDASLKG ADYDLTTIFE QTLVKNHPEH AVTFVENHDT QRGQALESTV EEWFKPSAYA 

       370        380        390        400        410        420 
LILLRKDGLP CLFYGDYYGI DGEFAQESFK EVLDTLLYAR KDLAYGEQTD YFDDPNCIGW 

       430        440        450        460        470        480 
TRSGNEDCTP LAVTISNDAA NNKSMEIGSD WAGQTFYDIL GNCSDTVTID EDGWGDFPVS 

       490 
EKSVSVWTIQ D 

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References

[1]"Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus."
Bolotin A., Quinquis B., Renault P., Sorokin A., Ehrlich S.D., Kulakauskas S., Lapidus A., Goltsman E., Mazur M., Pusch G.D., Fonstein M., Overbeek R., Kyprides N., Purnelle B., Prozzi D., Ngui K., Masuy D., Hancy F. expand/collapse author list , Burteau S., Boutry M., Delcour J., Goffeau A., Hols P.
Nat. Biotechnol. 22:1554-1558(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-250 / LMG 18311.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000023 Genomic DNA. Translation: AAV61145.1.
RefSeqYP_139960.1. NC_006448.1.

3D structure databases

ProteinModelPortalQ5M393.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING264199.stu1542.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAV61145; AAV61145; stu1542.
GeneID3163852.
KEGGstl:stu1542.
PATRIC19804628. VBIStrThe97850_1512.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000094847.
KOK01176.
OMAFNGTDYD.
OrthoDBEOG65QWH3.
ProtClustDBPRK09441.

Enzyme and pathway databases

BioCycSTHE264199:GI6K-1488-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5M393_STRT2
AccessionPrimary (citable) accession number: Q5M393
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: November 13, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)