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Protein
Submitted name:

Alpha-amylase

Gene

amyL

Organism
Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei242 – 2421NucleophileUniRule annotation
Active sitei272 – 2721Proton donorUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciSTHE264199:GI6K-1488-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:amyLImported
Ordered Locus Names:stu1542Imported
OrganismiStreptococcus thermophilus (strain ATCC BAA-250 / LMG 18311)Imported
Taxonomic identifieri264199 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000001170 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi264199.stu1542.

Structurei

3D structure databases

ProteinModelPortaliQ5M393.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5M393-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTNKEKTMT NQTAMQYFEW YLPSDGQHWN NLAEDAQHLA DLGISHVWMP
60 70 80 90 100
PAFKATNKDD VGYGVYDLFD LGEFDQKGTI RTKYGLKEEY LNAINQLKNV
110 120 130 140 150
GIIPMADVVL NHKAAADKLE TFYVVEVDPE DRTKVISEPF EIEGWTHFTF
160 170 180 190 200
DGRQKAYNDF EWHWYHFNGT DFDAKRNKKG IYLIQGDNKG WAHNDLVDNE
210 220 230 240 250
NGNFDYLMFA NLDYRHPEVI ENIYEWADWF VETTGVQGFR MDAIKHIDYF
260 270 280 290 300
FMRNFIRDVK EKQGQDFYVF GEFWNAKEED NNTYLEKTEN RFDLVDVRLH
310 320 330 340 350
YNLYDASLKG ADYDLTTIFE QTLVKNHPEH AVTFVENHDT QRGQALESTV
360 370 380 390 400
EEWFKPSAYA LILLRKDGLP CLFYGDYYGI DGEFAQESFK EVLDTLLYAR
410 420 430 440 450
KDLAYGEQTD YFDDPNCIGW TRSGNEDCTP LAVTISNDAA NNKSMEIGSD
460 470 480 490
WAGQTFYDIL GNCSDTVTID EDGWGDFPVS EKSVSVWTIQ D
Length:491
Mass (Da):57,031
Last modified:February 1, 2005 - v1
Checksum:i6B4075225CBF4E64
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000023 Genomic DNA. Translation: AAV61145.1.
RefSeqiWP_011226384.1. NC_006448.1.
YP_139960.1. NC_006448.1.

Genome annotation databases

EnsemblBacteriaiAAV61145; AAV61145; stu1542.
KEGGistl:stu1542.
PATRICi19804628. VBIStrThe97850_1512.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000023 Genomic DNA. Translation: AAV61145.1.
RefSeqiWP_011226384.1. NC_006448.1.
YP_139960.1. NC_006448.1.

3D structure databases

ProteinModelPortaliQ5M393.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi264199.stu1542.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV61145; AAV61145; stu1542.
KEGGistl:stu1542.
PATRICi19804628. VBIStrThe97850_1512.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciSTHE264199:GI6K-1488-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-250 / LMG 18311Imported.

Entry informationi

Entry nameiQ5M393_STRT2
AccessioniPrimary (citable) accession number: Q5M393
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: April 29, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.