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Protein

Probable protein kinase UbiB

Gene

ubiB

Organism
Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.SAAS annotation

Pathway: ubiquinone biosynthesis

This protein regulates the pathway ubiquinone biosynthesis, which is part of Cofactor biosynthesis.SAAS annotation
View all proteins of this organism that are known to be involved in the pathway ubiquinone biosynthesis and in Cofactor biosynthesis.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

KinaseSAAS annotation, OxidoreductaseImported, Transferase

Keywords - Biological processi

Ubiquinone biosynthesisSAAS annotation

Keywords - Ligandi

ATP-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

UniPathwayiUPA00232.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein kinase UbiBSAAS annotation (EC:2.7.-.-SAAS annotation)
Gene namesi
Name:ubiBImported
Ordered Locus Names:SPO0144Imported
OrganismiRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)Imported
Taxonomic identifieri246200 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
ProteomesiUP000001023 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membraneSAAS annotation, Cell membrane, Membrane

Interactioni

Protein-protein interaction databases

STRINGi246200.SPO0144.

Structurei

3D structure databases

ProteinModelPortaliQ5LWU1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains protein kinase domain.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

HOGENOMiHOG000264438.
KOiK03688.
OMAiQENICLT.
OrthoDBiEOG61P6SS.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR010232. UbiB.
IPR004147. UbiB_dom.
[Graphical view]
PfamiPF03109. ABC1. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR01982. UbiB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5LWU1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRGPHNIIRL IRTGATLERN GAMAAVLDAF DAPRPLRILA RALGKPFQWL
60 70 80 90 100
GFKGDPSLPP ATRALMAMGP AYIKFGQVLS TRPDVVGQDL ADQLRVLQDQ
110 120 130 140 150
LPPFPRAVAM REVEKELGRP LPEMFSEFSE PIAAASIAQV HRARLADSGE
160 170 180 190 200
DVAVKVLRPG IERAFRKDVD AFYFAARIVD LFAPGARRLR PMEVIEHFDG
210 220 230 240 250
VVRGELDLRL ESAAASEFAD NTKEDAGFRL PPVRWSLSAR RVMTLGWADG
260 270 280 290 300
VPLGDNAALD AAGHNRRDLG ERVLRLFLLH ALRDGFFHAD MHQGNLKVAA
310 320 330 340 350
DGDIIAYDFG IMGHIDEYTR RVYAEILFGF IRRDYKRVAE VHFEAGYVPA
360 370 380 390 400
TQDVDEFARA LRAVGEPIFG MDATHISMGR LLSYLFEVTE RFGMETRTEL
410 420 430 440 450
ILLQRTMVVV EGVARSLDPH INIWQVARPV VEDYIKQSIG PRAVLADLGK
460 470 480 490 500
TALVVARFGP RLPDLVERAL VAQSQPGLVE KPGRSAAFWP ALGGALIGGG

VVLLASLFI
Length:509
Mass (Da):56,175
Last modified:February 1, 2005 - v1
Checksum:i52335731418F5A6D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000031 Genomic DNA. Translation: AAV93472.1.
RefSeqiWP_011045915.1. NC_003911.12.
YP_165416.1. NC_003911.12.

Genome annotation databases

EnsemblBacteriaiAAV93472; AAV93472; SPO0144.
KEGGisil:SPO0144.
PATRICi23373535. VBIRuePom114501_0153.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000031 Genomic DNA. Translation: AAV93472.1.
RefSeqiWP_011045915.1. NC_003911.12.
YP_165416.1. NC_003911.12.

3D structure databases

ProteinModelPortaliQ5LWU1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246200.SPO0144.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV93472; AAV93472; SPO0144.
KEGGisil:SPO0144.
PATRICi23373535. VBIRuePom114501_0153.

Phylogenomic databases

HOGENOMiHOG000264438.
KOiK03688.
OMAiQENICLT.
OrthoDBiEOG61P6SS.

Enzyme and pathway databases

UniPathwayiUPA00232.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR010232. UbiB.
IPR004147. UbiB_dom.
[Graphical view]
PfamiPF03109. ABC1. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR01982. UbiB. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700808 / DSM 15171 / DSS-3Imported.

Entry informationi

Entry nameiQ5LWU1_RUEPO
AccessioniPrimary (citable) accession number: Q5LWU1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: April 29, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.