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Protein
Submitted name:

Uncharacterized protein

Gene

SPO0403

Organism
Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:SPO0403Imported
OrganismiRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)Imported
Taxonomic identifieri246200 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
ProteomesiUP000001023: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi246200.SPO0403.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000147851.
KOiK04097.
OMAiEWATRRY.
OrthoDBiEOG66MQMW.

Family and domain databases

Gene3Di1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProiIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMiSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEiPS50404. GST_NTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5LWD9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTYDLYIGDR SFSSWSLRGW LMLEKFGIPY RSHLVGLYSG TMAADLAPVA
60 70 80 90 100
PARQVPALRT PDGIALGQSL AMAETLAERH PEAGLWPADP AARATARWLC
110 120 130 140 150
AEMVSSFTAL RGECPMQLLH CYEGFQPGAG TLADLARIET LWSHARAVSG
160 170 180 190 200
AATGPLFGTY SLADVFYVPV AARIIGYGLP VSAAARDYCL FLLGDTAVRQ
210 220 230 240 250
WRAMGLTVRY DPMPYGLDLP VRDWPVGTPG AARAVEAGPS VNTACPYSGD
260 270 280 290
PVSDFLELDG RVWGFCNAFC RDKTVADPGA WPKFTAMVAK G
Length:291
Mass (Da):31,331
Last modified:February 19, 2014 - v2
Checksum:i9928775CE2D1FAD9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000031 Genomic DNA. Translation: AAV93721.2.
RefSeqiWP_030003165.1. NC_003911.12.
YP_165666.2. NC_003911.12.

Genome annotation databases

EnsemblBacteriaiAAV93721; AAV93721; SPO0403.
GeneIDi3196259.
KEGGisil:SPO0403.
PATRICi23374067. VBIRuePom114501_0410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000031 Genomic DNA. Translation: AAV93721.2.
RefSeqiWP_030003165.1. NC_003911.12.
YP_165666.2. NC_003911.12.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246200.SPO0403.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV93721; AAV93721; SPO0403.
GeneIDi3196259.
KEGGisil:SPO0403.
PATRICi23374067. VBIRuePom114501_0410.

Phylogenomic databases

HOGENOMiHOG000147851.
KOiK04097.
OMAiEWATRRY.
OrthoDBiEOG66MQMW.

Family and domain databases

Gene3Di1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProiIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMiSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEiPS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700808 / DSM 15171 / DSS-3Imported.

Entry informationi

Entry nameiQ5LWD9_RUEPO
AccessioniPrimary (citable) accession number: Q5LWD9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 19, 2014
Last modified: January 7, 2015
This is version 62 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.