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Q5LVN3

- SYH_RUEPO

UniProt

Q5LVN3 - SYH_RUEPO

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Protein
Histidine--tRNA ligase
Gene
hisS, SPO0667
Organism
Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. histidine-tRNA ligase activity Source: UniProtKB-EC

GO - Biological processi

  1. histidyl-tRNA aminoacylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Histidine--tRNA ligase (EC:6.1.1.21)
Alternative name(s):
Histidyl-tRNA synthetase
Short name:
HisRS
Gene namesi
Name:hisS
Ordered Locus Names:SPO0667
OrganismiRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Taxonomic identifieri246200 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
ProteomesiUP000001023: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 495495Histidine--tRNA ligaseUniRule annotation
PRO_0000136248Add
BLAST

Interactioni

Subunit structurei

Homodimer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi246200.SPO0667.

Structurei

3D structure databases

ProteinModelPortaliQ5LVN3.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0124.
HOGENOMiHOG000018071.
KOiK01892.
OMAiIIRYVSF.
OrthoDBiEOG6BPDH4.

Family and domain databases

Gene3Di3.40.50.800. 1 hit.
HAMAPiMF_00127. His_tRNA_synth.
InterProiIPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR015807. His-tRNA-ligase.
IPR004516. HisRS/HisZ.
[Graphical view]
PANTHERiPTHR11476. PTHR11476. 1 hit.
PfamiPF03129. HGTP_anticodon. 1 hit.
[Graphical view]
PIRSFiPIRSF001549. His-tRNA_synth. 1 hit.
SUPFAMiSSF52954. SSF52954. 1 hit.
TIGRFAMsiTIGR00442. hisS. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5LVN3-1 [UniParc]FASTAAdd to Basket

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MAKPKKTPRP KAETPKGFRD YFGAEVTQRT EMLRDIAGVY HRYGFEALES    50
SAVETVEALG KFLPDVDRPN EGVFAWQESE DDGAGDWMAL RYDLTAPLAR 100
VYAQHRNDLP TPYRRYAMGP VWRNEKPGPG RYRQFYQCDA DTVGSASMAA 150
DAEICAMLSD TLETVGIPRG DYVVRVNNRK VLNGVLETMG LADEGQRDAV 200
LRTIDKFDKV GEDGVRELLG KGRLDASGAF IDGVGLSDDQ AGPVLAFLTS 250
RGADAATTVA NLRAAVGASQ IGVQGIDELE QIGDLLAAGG YGPDRIVIDP 300
SVVRGLGYYT GPVYEAELTF EIFDEKGRKR QFGSVSGGGR YDDLVKRFTG 350
QEVPATGVSI GVDRLLAALR EKGRIRTAER GPVVVTVMDR DRMADYQAMV 400
AELRNAGIRA EVYLGNPKNF GNQLKYADKR NSPVAVIEGG DERANGVVQI 450
KDLILGAQIA ANATLEEWKE RPSQYEVARA DLVAKVREIL AEQAG 495
Length:495
Mass (Da):53,962
Last modified:February 1, 2005 - v1
Checksum:i0BD396AF615967FE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000031 Genomic DNA. Translation: AAV93975.1.
RefSeqiYP_165922.1. NC_003911.12.

Genome annotation databases

EnsemblBacteriaiAAV93975; AAV93975; SPO0667.
GeneIDi3192980.
KEGGisil:SPO0667.
PATRICi23374601. VBIRuePom114501_0674.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000031 Genomic DNA. Translation: AAV93975.1 .
RefSeqi YP_165922.1. NC_003911.12.

3D structure databases

ProteinModelPortali Q5LVN3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 246200.SPO0667.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAV93975 ; AAV93975 ; SPO0667 .
GeneIDi 3192980.
KEGGi sil:SPO0667.
PATRICi 23374601. VBIRuePom114501_0674.

Phylogenomic databases

eggNOGi COG0124.
HOGENOMi HOG000018071.
KOi K01892.
OMAi IIRYVSF.
OrthoDBi EOG6BPDH4.

Family and domain databases

Gene3Di 3.40.50.800. 1 hit.
HAMAPi MF_00127. His_tRNA_synth.
InterProi IPR006195. aa-tRNA-synth_II.
IPR004154. Anticodon-bd.
IPR015807. His-tRNA-ligase.
IPR004516. HisRS/HisZ.
[Graphical view ]
PANTHERi PTHR11476. PTHR11476. 1 hit.
Pfami PF03129. HGTP_anticodon. 1 hit.
[Graphical view ]
PIRSFi PIRSF001549. His-tRNA_synth. 1 hit.
SUPFAMi SSF52954. SSF52954. 1 hit.
TIGRFAMsi TIGR00442. hisS. 1 hit.
PROSITEi PS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700808 / DSM 15171 / DSS-3.

Entry informationi

Entry nameiSYH_RUEPO
AccessioniPrimary (citable) accession number: Q5LVN3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: February 1, 2005
Last modified: May 14, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi