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Q5LUV5 (Q5LUV5_SILPO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
2-dehydro-3-deoxyphosphooctonate aldolase HAMAP MF_00056
EC=2.5.1.55 HAMAP MF_00056
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthase HAMAP MF_00056
KDO-8-phosphate synthase HAMAP MF_00056
Phospho-2-dehydro-3-deoxyoctonate aldolase HAMAP MF_00056
Gene names
Name:kdsA HAMAP MF_00056 EMBL AAV94252.1
Ordered Locus Names:SPO0947
OrganismSilicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) [Complete proteome] [HAMAP]
Taxonomic identifier246200 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length277 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate. HAMAP MF_00056 SAAS SAAS006269

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis. HAMAP MF_00056 SAAS SAAS006269

Carbohydrate biosynthesis; 3-deoxy-D-manno-octulosonate biosynthesis; 3-deoxy-D-manno-octulosonate from D-ribulose 5-phosphate: step 2/3. HAMAP MF_00056 SAAS SAAS006269

Subcellular location

Cytoplasm By similarity HAMAP MF_00056 SAAS SAAS006269.

Sequence similarities

Belongs to the KdsA family. HAMAP MF_00056

Sequences

Sequence LengthMass (Da)Tools
Q5LUV5 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: C450310F05CB2B99

FASTA27729,228
        10         20         30         40         50         60 
MKHVQIADLT VGNDLPLTII AGPCQLESAD HAQMIAGTLK EACDAAGAQY VFKASYDKAN 

        70         80         90        100        110        120 
RTSLGGKRGM GIDAGLKVLD DIRRTMGVPV LTDVHSEAQC AIAAEAVDVL QIPAFLCRQT 

       130        140        150        160        170        180 
DMLLAAGNTG AVINVKKGQF LAPWEMGNIV DKIASTGNEN ILLTERGVSF GYNTLVADMR 

       190        200        210        220        230        240 
ALPIMAQTGY PVVMDATHSV QQPGGRGGSS GGQREFAPVM ARAAVAVGTA AVFMETHQDP 

       250        260        270 
DNAPCDGPNM IYLDEMPGLI DTLMRFDALA KANPIQI

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000031 Genomic DNA. Translation: AAV94252.1.
RefSeqYP_166200.1. NC_003911.11.

3D structure databases

ProteinModelPortalQ5LUV5.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3195476.
GenomeReviewsGene locus SPO0947 in contig CP000031_GR.
KEGGsil:SPO0947.
NMPDRfig|246200.3.peg.1368.
PATRIC23375179. VBIRuePom114501_0961.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG575990.
OMAESRDHAF.
ProtClustDBPRK05198.

Enzyme and pathway databases

BioCycRPOM246200:SPO_0947-MONOMER.

Family and domain databases

HAMAPMF_00056. KDO8P_synth.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01627.
PANTHERPTHR21057:SF2. KDO8P_synthase. 1 hit.
PfamPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR01362. KDO8P_synth. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ5LUV5_SILPO
AccessionPrimary (citable) accession number: Q5LUV5
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: January 25, 2012
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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