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Q5LU07 (Q5LU07_SILPO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA topoisomerase IV, B subunit EMBL AAV94545.1
EC=5.99.1.- EMBL AAV94545.1
Gene names
Name:parE EMBL AAV94545.1
Ordered Locus Names:SPO1253
OrganismSilicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) [Complete proteome] [HAMAP]
Taxonomic identifier246200 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length652 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the type II topoisomerase family. RuleBase RU000380

Sequences

Sequence LengthMass (Da)Tools
Q5LU07 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 25415E0E02B40461

FASTA65271,775
        10         20         30         40         50         60 
MPEDLLSGAQ TATYDASSIE VLEGLEPVRK RPGMYIGGTD ERALHHMVAE VLDNSMDEAV 

        70         80         90        100        110        120 
AGFANRIEVE LHADYALTVR DNGRGIPVDP HPKFPGKSAL EVILCTLHAG GKFSGKAYQT 

       130        140        150        160        170        180 
SGGLHGVGAS VVNALSDSMV VQVARDKLLY EQRFSRGLPL GPIQQIGAAP NRRGTTVTFH 

       190        200        210        220        230        240 
ADEEIFGHHR FKPARLFKSI RSKAYLFSGV EIRWKSAIDD GETPTEATFH FPGGLADYLK 

       250        260        270        280        290        300 
ETLGKASTYA EQPFAGTVDF TEKFNTPGKV EWAINWTPSR DGFIQSYCNT VPTPEGGTHE 

       310        320        330        340        350        360 
AGFWSAILKG IRAYGELISN KKAAQITRDD LLTGGCALVS CFIREPEFVG QTKDRLATVE 

       370        380        390        400        410        420 
AQRLVEGAVR DHFDNWLAAD TKSAGAILDF LVLRAEERIR RRQEKETQRK TATKKLRLPG 

       430        440        450        460        470        480 
KLVDCSATSR EGTELFIVEG DSAGGSAKMA RDRKTQALLP LRGKILNVLG AASSKLGSNQ 

       490        500        510        520        530        540 
EISDLTQALG VGLGTRFNVD DLRYDKIIIM TDADVDGAHI AALLMTFFFT QMRPMIDTGH 

       550        560        570        580        590        600 
LYLACPPLYR LTQGAKRVYC LDEAERDEWL AKGLGGKGKI DVSRFKGLGE MDAKDLKDTT 

       610        620        630        640        650 
MNPETRKLIR VTIDEDEPGE TGDLVERLMG KKPELRFQYI QENARFVEEL DV

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000031 Genomic DNA. Translation: AAV94545.1.
RefSeqYP_166498.1. NC_003911.11.

3D structure databases

ProteinModelPortalQ5LU07.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3192730.
GenomeReviewsGene locus SPO1253 in contig CP000031_GR.
KEGGsil:SPO1253.
NMPDRfig|246200.3.peg.1666.
PATRIC23375809. VBIRuePom114501_1270.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG304889.
OMAQARDKEF.
ProtClustDBPRK05559.

Enzyme and pathway databases

BioCycRPOM246200:SPO_1253-MONOMER.

Family and domain databases

InterProIPR003594. ATPase-like_ATP-bd.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
IPR001241. Topo_IIA.
IPR013759. Topo_IIA_B/N_ab.
IPR002288. Topo_IIA_B_C.
IPR013506. Topo_IIA_bsu_dom2.
IPR013760. Topo_IIA_cen.
IPR018522. TopoIIA_CS.
IPR005737. TopoIV_B_Gneg.
[Graphical view]
Gene3DG3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit.
G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit.
G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KOK02622.
PfamPF00204. DNA_gyraseB. 1 hit.
PF00986. DNA_gyraseB_C. 1 hit.
PF02518. HATPase_c. 1 hit.
[Graphical view]
PRINTSPR00418. TPI2FAMILY.
SMARTSM00387. HATPase_c. 1 hit.
SM00433. TOP2c. 1 hit.
[Graphical view]
SUPFAMSSF55874. ATP_bd_ATPase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMsTIGR01055. ParE_Gneg. 1 hit.
PROSITEPS00177. TOPOISOMERASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5LU07_SILPO
AccessionPrimary (citable) accession number: Q5LU07
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: January 25, 2012
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info