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Q5LS50 (Q5LS50_RUEPO) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:trgB EMBL AAV95197.2
Ordered Locus Names:SPO1920 EMBL AAV95197.2
OrganismRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi) [Complete proteome] [HAMAP] EMBL AAV95197.2
Taxonomic identifier246200 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria

Protein attributes

Sequence length371 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Nudix hydrolase family. RuleBase RU003476

Sequences

Sequence LengthMass (Da)Tools
Q5LS50 [UniParc].

Last modified February 19, 2014. Version 2.
Checksum: A3371E6434608908

FASTA37140,867
        10         20         30         40         50         60 
MTDLFFYGTL RHAPLLEVVL GTTDPRPEIT AASLPDHAVF SIQGQPFPMI QTAPGARAEG 

        70         80         90        100        110        120 
LLVRGLTPLQ LDRLNFYEGG FAYDLQAVEV TLPTGGSAKA QVFFPQEGLW SPEAPWHLAD 

       130        140        150        160        170        180 
WVAEWAPLSL HAAAEVMDFH GRLTPEQVGR SFPAIRLRAA ARLAAAARPA DPARDLSRDV 

       190        200        210        220        230        240 
VVERYSRAYV NYFGLDEIDI RFRRNDGTMS DCLNRGALVT GQVTIVLPYD PVRDQVLLVE 

       250        260        270        280        290        300 
QFRVPVYMIG DPAPWMLEAV AGMIDPGETP EQAAERELLE EAHLTAYRLE PAGKAYSSCG 

       310        320        330        340        350        360 
SSTQFSHLFL ALADIRTETD SGGLASEGED IRTVILSFDA LMELIDTQQI KDLGLVAVAN 

       370 
WLARHRDRLR G 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000031 Genomic DNA. Translation: AAV95197.2.
RefSeqYP_167155.2. NC_003911.12.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING246200.SPO1920.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAV95197; AAV95197; SPO1920.
GeneID3195180.
KEGGsil:SPO1920.
PATRIC23377169. VBIRuePom114501_1946.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000250677.
OMAFFAVEEY.
OrthoDBEOG6SNDRS.

Family and domain databases

Gene3D3.90.79.10. 1 hit.
InterProIPR009288. AIG2-like.
IPR013024. Butirosin_synth_BtrG-like.
IPR004385. NDP_pyrophosphatase.
IPR020084. NUDIX_hydrolase_CS.
IPR000086. NUDIX_hydrolase_dom.
IPR015797. NUDIX_hydrolase_dom-like.
[Graphical view]
PfamPF06094. AIG2. 1 hit.
PF00293. NUDIX. 1 hit.
[Graphical view]
SUPFAMSSF110857. SSF110857. 1 hit.
SSF55811. SSF55811. 1 hit.
TIGRFAMsTIGR00052. TIGR00052. 1 hit.
PROSITEPS51462. NUDIX. 1 hit.
PS00893. NUDIX_BOX. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5LS50_RUEPO
AccessionPrimary (citable) accession number: Q5LS50
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 19, 2014
Last modified: July 9, 2014
This is version 55 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)