Q5LRK0 (Q5LRK0_SILPO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA-3-methyladenine glycosylase II, putative EMBL AAV95396.1

Gene names

Ordered Locus Names:

SPO2127

Organism

Silicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) [Complete proteome] [HAMAP]

Taxonomic identifier

246200 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length	210 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	base-excision repair Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5LRK0 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: A348BAB024CAC8CA	FASTA	210	23,140
	10 20 30 40 50 60 MTVGRIIETP DCVAEGAAWL AESCPRMAHA MTLTGPLPLR RRPDGFAELL SAIVSQQVSV 70 80 90 100 110 120 ASANAIWARM RAAGLIGPRK ILWASDDDLR AAGLSRQKIR YARELAKARI DFNGLRAAPD 130 140 150 160 170 180 ADVVAELTRV PGIGVWTAEI YAMFSLGRAD VFAPGDLALQ EAARVLYELP ERPSERALRQ 190 200 210 MALAWSPWRS VAARVLWAYY RVAKDREGIR

References

[1]

"Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment." Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B., Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.M., Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M. , Ye W., Miller T.R., Carlton J., Rasko D.A., Paulsen I.T., Ren Q., Daugherty S.C., DeBoy R.T., Dodson R.J., Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J., Haft D.H., Selengut J., Ward N. Nature 432:910-913(2004) [PubMed: 15602564] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700808 / DSM 15171 / DSS-3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000031 Genomic DNA. Translation: AAV95396.1.
RefSeq	YP_167355.1. NC_003911.11.
3D structure databases
ProteinModelPortal	Q5LRK0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3193412.
GenomeReviews	Gene locus SPO2127 in contig CP000031_GR.
KEGG	sil:SPO2127.
NMPDR	fig|246200.3.peg.2391.
PATRIC	23377597. VBIRuePom114501_2153.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG544181.
OMA	KGIGNWT.
ProtClustDB	CLSK933770.
Enzyme and pathway databases
BioCyc	RPOM246200:SPO_2127-MONOMER.
Family and domain databases
InterPro	IPR011257. DNA_glycosylase. IPR003265. HhH-GPD_domain. IPR023170. HTH_base_excis_C. [Graphical view]
Gene3D	G3DSA:1.10.340.30. DNA_glycosylase. 1 hit. G3DSA:1.10.1670.10. HTH_base_excis_C. 1 hit.
KO	K01247.
Pfam	PF00730. HhH-GPD. 1 hit. [Graphical view]
SMART	SM00478. ENDO3c. 1 hit. [Graphical view]
SUPFAM	SSF48150. DNA_glycsylse. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5LRK0_SILPO

Accession

Primary (citable) accession number: Q5LRK0

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 2005
Last sequence update:	February 1, 2005
Last modified:	December 14, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)