Q5LR20 (Q5LR20_SILPO) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 46.
History...
Names and origin
| Protein names | Submitted name: Aconitate hydratase 1 EMBL AAV95574.1 EC=4.2.1.3 EMBL AAV95574.1 | ||||
| Gene names |
| ||||
| Organism | Silicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 246200 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria |
Protein attributes
| Sequence length | 896 AA. |
| Sequence status | Complete. |
| Protein existence | Predicted |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Lyase EMBL AAV95574.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Molecular function | 4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro aconitate hydratase activityInferred from electronic annotation. Source: EC citrate hydro-lyase (cis-aconitate-forming) activityInferred from electronic annotation. Source: EC isocitrate hydro-lyase (cis-aconitate-forming) activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequences
| ||||||||||||||||||
References
| [1] | "Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment." Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B., Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.M., Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M. Ward N.Nature 432:910-913(2004) [PubMed: 15602564] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700808 / DSM 15171 / DSS-3. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000031 Genomic DNA. Translation: AAV95574.1. |
| RefSeq | YP_167535.1. NC_003911.11. |
3D structure databases | |
| ProteinModelPortal | Q5LR20. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 3193296. |
| GenomeReviews | Gene locus SPO2312 in contig CP000031_GR. |
| KEGG | sil:SPO2312. |
| NMPDR | fig|246200.3.peg.2624. |
| PATRIC | 23377985. VBIRuePom114501_2343. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG289738. |
| OMA | YSKAQGM. |
| ProtClustDB | PRK09277. |
Enzyme and pathway databases | |
| BioCyc | RPOM246200:SPO_2312-MONOMER. |
Family and domain databases | |
| InterPro | IPR015931. Acnase/IPM_dHydase_lsu_aba_1/3. IPR015937. Acoase/IPM_deHydtase. IPR001030. Acoase/IPM_deHydtase_lsu_aba. IPR015928. Aconitase/3IPM_dehydase_swvl. IPR006249. Aconitase/Fe_reg_prot_2. IPR015934. Aconitase/Fe_reg_prot_2/AcnD. IPR015932. Aconitase/IPMdHydase_lsu_aba_2. IPR018136. Aconitase_4Fe-4S_BS. IPR000573. AconitaseA/IPMdHydase_ssu_swvl. [Graphical view] |
| Gene3D | G3DSA:3.30.499.10. Acnase/IPM_dHydase_lsu_aba_1/3. 2 hits. G3DSA:3.20.19.10. Aconitase/3IPM_dehydase_swvl. 1 hit. G3DSA:3.40.1060.10. Aconitase/IPMdHydase_lsu_aba_2. 1 hit. |
| KO | K01681. |
| PANTHER | PTHR11670. Aconitase-like_core. 1 hit. PTHR11670:SF1. Aconitase/Fe_reg_prot_2/AcnD. 1 hit. |
| Pfam | PF00330. Aconitase. 1 hit. PF00694. Aconitase_C. 1 hit. [Graphical view] |
| PRINTS | PR00415. ACONITASE. |
| SUPFAM | SSF52016. Aconitase/3IPM_dehydase_swvl. 1 hit. SSF53732. Aconitase_N. 1 hit. |
| TIGRFAMs | TIGR01341. Aconitase_1. 1 hit. |
| PROSITE | PS00450. ACONITASE_1. 1 hit. PS01244. ACONITASE_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q5LR20_SILPO | ||||||||
| Accession | Primary (citable) accession number: Q5LR20 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
