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Protein
Submitted name:

Uncharacterized protein

Gene

SPO2313

Organism
Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:SPO2313Imported
OrganismiRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)Imported
Taxonomic identifieri246200 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
Proteomesi
  • UP000001023 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi246200.SPO2313.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3FGVX-ray1.30A/B1-105[»]
ProteinModelPortaliQ5LR19.
SMRiQ5LR19.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5LR19.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 77ABMInterPro annotationAdd BLAST63

Phylogenomic databases

OMAiWENSETQ.
OrthoDBiPOG091H08WT.

Family and domain databases

InterProiIPR007138. ABM_dom.
IPR011008. Dimeric_a/b-barrel.
[Graphical view]
PfamiPF03992. ABM. 1 hit.
[Graphical view]
SUPFAMiSSF54909. SSF54909. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5LR19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTESDRDQEA SMREVVIVKS TPQRGKFNAF AELVGKLVSE TRDFPGCLGA
60 70 80 90 100
YLMLAPERNE QVVMHIWETP DALEAYLTWR ADRGDFLEIN EYLEVEQDFK

TYQLA
Length:105
Mass (Da):12,150
Last modified:February 1, 2005 - v1
Checksum:iD5595479599ECB63
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000031 Genomic DNA. Translation: AAV95575.1.

Genome annotation databases

EnsemblBacteriaiAAV95575; AAV95575; SPO2313.
KEGGisil:SPO2313.
PATRICi23377987. VBIRuePom114501_2344.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000031 Genomic DNA. Translation: AAV95575.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3FGVX-ray1.30A/B1-105[»]
ProteinModelPortaliQ5LR19.
SMRiQ5LR19.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246200.SPO2313.

Protocols and materials databases

DNASUi3194102.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV95575; AAV95575; SPO2313.
KEGGisil:SPO2313.
PATRICi23377987. VBIRuePom114501_2344.

Phylogenomic databases

OMAiWENSETQ.
OrthoDBiPOG091H08WT.

Miscellaneous databases

EvolutionaryTraceiQ5LR19.

Family and domain databases

InterProiIPR007138. ABM_dom.
IPR011008. Dimeric_a/b-barrel.
[Graphical view]
PfamiPF03992. ABM. 1 hit.
[Graphical view]
SUPFAMiSSF54909. SSF54909. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ5LR19_RUEPO
AccessioniPrimary (citable) accession number: Q5LR19
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: November 2, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.