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Protein
Submitted name:

DNA-binding response regulator, LuxR family

Gene

SPO2369

Organism
Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi170 – 189H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotationImported
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciRPOM246200:G1G48-2409-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-binding response regulator, LuxR familyImported
Gene namesi
Ordered Locus Names:SPO2369Imported
OrganismiRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)Imported
Taxonomic identifieri246200 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
Proteomesi
  • UP000001023 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei554-aspartylphosphatePROSITE-ProRule annotation1

Interactioni

Protein-protein interaction databases

STRINGi246200.SPO2369

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2QSJX-ray2.10A/B2-144[»]
ProteinModelPortaliQ5LQW4
SMRiQ5LQW4
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ5LQW4

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 120Response regulatoryInterPro annotationAdd BLAST118
Domaini146 – 211HTH luxR-typeInterPro annotationAdd BLAST66

Phylogenomic databases

eggNOGiENOG4105N51 Bacteria
COG2197 LUCA
HOGENOMiHOG000034813
OMAiMINETAG
OrthoDBiPOG091H05B9

Family and domain databases

CDDicd06170 LuxR_C_like, 1 hit
cd00156 REC, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR011006 CheY-like_superfamily
IPR016032 Sig_transdc_resp-reg_C-effctor
IPR001789 Sig_transdc_resp-reg_receiver
IPR000792 Tscrpt_reg_LuxR_C
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF00196 GerE, 1 hit
PF00072 Response_reg, 1 hit
PRINTSiPR00038 HTHLUXR
SMARTiView protein in SMART
SM00421 HTH_LUXR, 1 hit
SM00448 REC, 1 hit
SUPFAMiSSF46894 SSF46894, 1 hit
SSF52172 SSF52172, 1 hit
PROSITEiView protein in PROSITE
PS50043 HTH_LUXR_2, 1 hit
PS50110 RESPONSE_REGULATORY, 1 hit

Sequencei

Sequence statusi: Complete.

Q5LQW4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVVLIVDDH HLIRAGAKNL LEGAFSGMRV EGAETVSDAL AFLEADNTVD
60 70 80 90 100
LILLDVNLPD AEAIDGLVRL KRFDPSNAVA LISGETDHEL IRAALEAGAD
110 120 130 140 150
GFIPKSADPQ VLIHAVSLIL EGEIFLPRSY LQGGRMAEVA TPLDSSERPE
160 170 180 190 200
QNLTPRQRDV FELMCKGLAN KEIARLLDLS ESTVKSHVSA IFKQIGTTSR
210 220
SKTIAIFRQE GVALPSASED
Length:220
Mass (Da):23,740
Last modified:February 1, 2005 - v1
Checksum:iC958C54CE64847E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000031 Genomic DNA Translation: AAV95629.1
RefSeqiWP_011048085.1, NC_003911.12

Genome annotation databases

EnsemblBacteriaiAAV95629; AAV95629; SPO2369
KEGGisil:SPO2369

Similar proteinsi

Entry informationi

Entry nameiQ5LQW4_RUEPO
AccessioniPrimary (citable) accession number: Q5LQW4
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: March 28, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health