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Protein

Putative arginyl-tRNA--protein transferase

Gene

ate

Organism
Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

May conjugate Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate.UniRule annotation

Catalytic activityi

L-arginyl-tRNA(Arg) + [protein] = tRNA(Arg) + L-arginyl-[protein].UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Acyltransferase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Putative arginyl-tRNA--protein transferaseUniRule annotation (EC:2.3.2.8UniRule annotation)
Short name:
ArginyltransferaseUniRule annotation
Short name:
R-transferaseUniRule annotation
Gene namesi
Name:ateUniRule annotation
Ordered Locus Names:SPO2569
OrganismiRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Taxonomic identifieri246200 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
Proteomesi
  • UP000001023 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 273273Putative arginyl-tRNA--protein transferasePRO_0000263218Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi246200.SPO2569.

Family & Domainsi

Sequence similaritiesi

Belongs to the R-transferase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DWA. Bacteria.
COG2935. LUCA.
HOGENOMiHOG000003225.
KOiK00685.
OrthoDBiEOG654P1Q.

Family and domain databases

HAMAPiMF_00689. Ate.
InterProiIPR016181. Acyl_CoA_acyltransferase.
IPR007472. Arg-tRNA-P_Trfase_C.
IPR017138. Arg-tRNA-P_Trfase_prd_prok.
IPR030700. Arg-tRNA_Trfase.
IPR007471. Arg_tRNA_PTrfase_N.
[Graphical view]
PANTHERiPTHR21367. PTHR21367. 1 hit.
PfamiPF04377. ATE_C. 1 hit.
PF04376. ATE_N. 1 hit.
[Graphical view]
PIRSFiPIRSF037208. ATE_pro_prd. 1 hit.
SUPFAMiSSF55729. SSF55729. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5LQC3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRHTLPIAPQ FYVTAPQPCP YLAGRMERKL FTALQGEGAE RLNNALSQQG
60 70 80 90 100
FRRSQNVLYR PSCADCAACL SARIDVSAFR ASRSQKRAMR RNAHLTRRAT
110 120 130 140 150
SPWATDEQYE LFRRYLDSRH ADGGMADMDV FEFAAMIEET PIRSRVIEYA
160 170 180 190 200
HRDTRALIGV SLTDVLDDGL SMVYSFYDPD LHRDSLGTHM ILDHIAIARE
210 220 230 240 250
AGLPYVYLGY WVPGSPKMGY KSRFSGLEIY LGGRWQAMTD PEAHDAIRHP
260 270
LSTDPIAEQV ANIQLPDRWP TGD
Length:273
Mass (Da):30,926
Last modified:December 12, 2006 - v2
Checksum:iA925B2575A86FA63
GO

Sequence cautioni

The sequence AAV95817.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000031 Genomic DNA. Translation: AAV95817.1. Different initiation.
RefSeqiWP_011048274.1. NC_003911.12.

Genome annotation databases

EnsemblBacteriaiAAV95817; AAV95817; SPO2569.
KEGGisil:SPO2569.
PATRICi23378541. VBIRuePom114501_2620.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000031 Genomic DNA. Translation: AAV95817.1. Different initiation.
RefSeqiWP_011048274.1. NC_003911.12.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi246200.SPO2569.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAV95817; AAV95817; SPO2569.
KEGGisil:SPO2569.
PATRICi23378541. VBIRuePom114501_2620.

Phylogenomic databases

eggNOGiENOG4105DWA. Bacteria.
COG2935. LUCA.
HOGENOMiHOG000003225.
KOiK00685.
OrthoDBiEOG654P1Q.

Family and domain databases

HAMAPiMF_00689. Ate.
InterProiIPR016181. Acyl_CoA_acyltransferase.
IPR007472. Arg-tRNA-P_Trfase_C.
IPR017138. Arg-tRNA-P_Trfase_prd_prok.
IPR030700. Arg-tRNA_Trfase.
IPR007471. Arg_tRNA_PTrfase_N.
[Graphical view]
PANTHERiPTHR21367. PTHR21367. 1 hit.
PfamiPF04377. ATE_C. 1 hit.
PF04376. ATE_N. 1 hit.
[Graphical view]
PIRSFiPIRSF037208. ATE_pro_prd. 1 hit.
SUPFAMiSSF55729. SSF55729. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700808 / DSM 15171 / DSS-3.
  2. "An updated genome annotation for the model marine bacterium Ruegeria pomeroyi DSS-3."
    Rivers A.R., Smith C.B., Moran M.A.
    Stand. Genomic Sci. 9:11-11(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: ATCC 700808 / DSM 15171 / DSS-3.

Entry informationi

Entry nameiATE_RUEPO
AccessioniPrimary (citable) accession number: Q5LQC3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: December 12, 2006
Last modified: November 11, 2015
This is version 72 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.