Q5LQ97 (Q5LQ97_SILPO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
5-aminolevulinic acid synthase EMBL AAV95844.1
EC=2.3.1.37 EMBL AAV95844.1

Gene names

Name:	hemA-1 EMBL AAV95844.1
Ordered Locus Names:	SPO2596

Organism

Silicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) [Complete proteome] [HAMAP]

Taxonomic identifier

246200 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ruegeria

Protein attributes

Sequence length	407 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU003693
Sequence similarities	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003693

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003693
Molecular function	Acyltransferase EMBL AAV95844.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tetrapyrrole biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	5-aminolevulinate synthase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring nitrogenous groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5LQ97 [UniParc]. Last modified February 1, 2005. Version 1. Checksum: 59AB7457484AD16C	FASTA	407	44,082
	10 20 30 40 50 60 MDYSVKLDAA IQKLHDEGRY RTFIDIERRK GHFPHAVWTR PDGSEKEITV WCGNDYLGMG 70 80 90 100 110 120 QNPVVLDAMQ EALVAAGAGS GGTRNISGTT VYHKRLEAEL ADLHGKEAAL LFTSAYIAND 130 140 150 160 170 180 ATLSTLPKLF PGLIIYSDAL NHASMIEGVR RNGGAKRIFR HNDVAHLREL LAADDPAAPK 190 200 210 220 230 240 LIVFESVYSM DGDFGPIADI CDLADEFGAL TYIDEVHAVG MYGPRGGGVT ERDNLAHRID 250 260 270 280 290 300 IINGTLAKAY GVMGGYIAAS AKMCDAIRSY APGFIFTTSL PPAVAAGAAA SVAYLKGAQE 310 320 330 340 350 360 LRDQHQTQAR ILKLRLKGLG LPLIDHGSHI VPVIVGDPVH TKKLSDMLLE DFGIYVQPIN 370 380 390 400 FPTVPRGTER LRFTPSPVHG PKEVDKLVHA MDALWSHCAL NRAELAG

References

[1]

"Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment." Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B., Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.M., Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M. , Ye W., Miller T.R., Carlton J., Rasko D.A., Paulsen I.T., Ren Q., Daugherty S.C., DeBoy R.T., Dodson R.J., Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J., Haft D.H., Selengut J., Ward N. Nature 432:910-913(2004) [PubMed: 15602564] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700808 / DSM 15171 / DSS-3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000031 Genomic DNA. Translation: AAV95844.1.
RefSeq	YP_167809.1. NC_003911.11.
3D structure databases
ProteinModelPortal	Q5LQ97.
SMR	Q5LQ97. Positions 1-395.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3194287.
GenomeReviews	Gene locus SPO2596 in contig CP000031_GR.
KEGG	sil:SPO2596.
NMPDR	fig|246200.3.peg.3066.
PATRIC	23378595. VBIRuePom114501_2647.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG649839.
OMA	NARCFAG.
ProtClustDB	PRK09064.
Enzyme and pathway databases
BioCyc	RPOM246200:SPO_2596-MONOMER.
Family and domain databases
InterPro	IPR010961. 4pyrrol_synth_NH2levulA_synth. IPR001917. Aminotrans_II_pyridoxalP_BS. IPR004839. Aminotransferase_I/II. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K00643.
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01821. 5aminolev_synth. 1 hit.
PROSITE	PS00599. AA_TRANSFER_CLASS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q5LQ97_SILPO

Accession

Primary (citable) accession number: Q5LQ97

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 2005
Last sequence update:	February 1, 2005
Last modified:	December 14, 2011
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)