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Q5LPB9

- Q5LPB9_RUEPO

UniProt

Q5LPB9 - Q5LPB9_RUEPO

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Protein
Submitted name: Thymidine phosphorylase
Gene
deoA, SPO2929
Organism
Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. phosphorylase activity Source: InterPro
  2. pyrimidine-nucleoside phosphorylase activity Source: InterPro
  3. thymidine phosphorylase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. pyrimidine nucleobase metabolic process Source: InterPro
  2. pyrimidine nucleoside metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosyltransferaseSAAS annotationsImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Thymidine phosphorylaseImported (EC:2.4.2.4Imported)
Gene namesi
Name:deoAImported
Ordered Locus Names:SPO2929Imported
OrganismiRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)Imported
Taxonomic identifieri246200 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
ProteomesiUP000001023: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi246200.SPO2929.

Structurei

3D structure databases

ProteinModelPortaliQ5LPB9.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000047313.
KOiK00758.
OMAiIHERITP.
OrthoDBiEOG61ZTGG.

Family and domain databases

Gene3Di3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
InterProiIPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR018090. Pyrmidine_PPas_bac/euk.
IPR000053. Pyrmidine_PPase.
IPR017872. Pyrmidine_PPase_CS.
[Graphical view]
PANTHERiPTHR10515. PTHR10515. 1 hit.
PfamiPF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view]
PIRSFiPIRSF000478. TP_PyNP. 1 hit.
SMARTiSM00941. PYNP_C. 1 hit.
[Graphical view]
SUPFAMiSSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsiTIGR02644. Y_phosphoryl. 1 hit.
PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q5LPB9-1 [UniParc]FASTAAdd to Basket

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MDARAIIARL RRHEVPSAAE LTWFAQGLAD GSVSDAQAGA FAMGVCMGRL    50
GSEGRAALTL AMRDTGDVLH WDFDGPVIDK HSTGGVGDCV SLVLAPALAE 100
CGTYVPMISG RGLGHTGGTL DKMEAIPGVT TQLGPDRLAQ VVRDTGAAIV 150
GATARIAPAD KRLYAIRDVT ATVESLDLIT ASILSKKLAA SPDALVLDVK 200
LGSGAFMKSP DEARALALAL TETANAAGCR TSALITDMSQ PLAPSLGNAL 250
EVGEVMRVLT SGHADDPLAQ LSAELGGVLL SDAGLATDAV SGAARIAAII 300
SDGRAAERFG RMIAAVGGPV QFVENWQRFL PEATVIREVP ARASGYVTAI 350
DGEVLGLAVV ALGGGRQVET DVVDPAVGLS RVIRLGTAVN PGTPLATIHA 400
ARQEAAEAAE ATLRAAITIG PEPVAAPPLI HERITP 436
Length:436
Mass (Da):44,550
Last modified:February 1, 2005 - v1
Checksum:i756D30DEEA4BC40D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000031 Genomic DNA. Translation: AAV96170.1.
RefSeqiYP_168137.1. NC_003911.12.

Genome annotation databases

EnsemblBacteriaiAAV96170; AAV96170; SPO2929.
GeneIDi3195037.
KEGGisil:SPO2929.
PATRICi23379287. VBIRuePom114501_2989.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000031 Genomic DNA. Translation: AAV96170.1 .
RefSeqi YP_168137.1. NC_003911.12.

3D structure databases

ProteinModelPortali Q5LPB9.
ModBasei Search...

Protein-protein interaction databases

STRINGi 246200.SPO2929.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAV96170 ; AAV96170 ; SPO2929 .
GeneIDi 3195037.
KEGGi sil:SPO2929.
PATRICi 23379287. VBIRuePom114501_2989.

Phylogenomic databases

HOGENOMi HOG000047313.
KOi K00758.
OMAi IHERITP.
OrthoDBi EOG61ZTGG.

Family and domain databases

Gene3Di 3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
InterProi IPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR018090. Pyrmidine_PPas_bac/euk.
IPR000053. Pyrmidine_PPase.
IPR017872. Pyrmidine_PPase_CS.
[Graphical view ]
PANTHERi PTHR10515. PTHR10515. 1 hit.
Pfami PF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view ]
PIRSFi PIRSF000478. TP_PyNP. 1 hit.
SMARTi SM00941. PYNP_C. 1 hit.
[Graphical view ]
SUPFAMi SSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsi TIGR02644. Y_phosphoryl. 1 hit.
PROSITEi PS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700808 / DSM 15171 / DSS-3.

Entry informationi

Entry nameiQ5LPB9_RUEPO
AccessioniPrimary (citable) accession number: Q5LPB9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: July 9, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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