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Q5LPB9

- Q5LPB9_RUEPO

UniProt

Q5LPB9 - Q5LPB9_RUEPO

Protein
Submitted name:

Thymidine phosphorylase

Gene

deoA

Organism
Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 62 (01 Oct 2014)
      Sequence version 1 (01 Feb 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. phosphorylase activity Source: InterPro
    2. pyrimidine-nucleoside phosphorylase activity Source: InterPro
    3. thymidine phosphorylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. pyrimidine nucleobase metabolic process Source: InterPro
    2. pyrimidine nucleoside metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosyltransferaseSAAS annotationImported, Transferase

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Thymidine phosphorylaseImported (EC:2.4.2.4Imported)
    Gene namesi
    Name:deoAImported
    Ordered Locus Names:SPO2929Imported
    OrganismiRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi)Imported
    Taxonomic identifieri246200 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria
    ProteomesiUP000001023: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi246200.SPO2929.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5LPB9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000047313.
    KOiK00758.
    OMAiIHERITP.
    OrthoDBiEOG61ZTGG.

    Family and domain databases

    Gene3Di3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    InterProiIPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR018090. Pyrmidine_PPas_bac/euk.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    [Graphical view]
    PANTHERiPTHR10515. PTHR10515. 1 hit.
    PfamiPF02885. Glycos_trans_3N. 1 hit.
    PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000478. TP_PyNP. 1 hit.
    SMARTiSM00941. PYNP_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsiTIGR02644. Y_phosphoryl. 1 hit.
    PROSITEiPS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q5LPB9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDARAIIARL RRHEVPSAAE LTWFAQGLAD GSVSDAQAGA FAMGVCMGRL    50
    GSEGRAALTL AMRDTGDVLH WDFDGPVIDK HSTGGVGDCV SLVLAPALAE 100
    CGTYVPMISG RGLGHTGGTL DKMEAIPGVT TQLGPDRLAQ VVRDTGAAIV 150
    GATARIAPAD KRLYAIRDVT ATVESLDLIT ASILSKKLAA SPDALVLDVK 200
    LGSGAFMKSP DEARALALAL TETANAAGCR TSALITDMSQ PLAPSLGNAL 250
    EVGEVMRVLT SGHADDPLAQ LSAELGGVLL SDAGLATDAV SGAARIAAII 300
    SDGRAAERFG RMIAAVGGPV QFVENWQRFL PEATVIREVP ARASGYVTAI 350
    DGEVLGLAVV ALGGGRQVET DVVDPAVGLS RVIRLGTAVN PGTPLATIHA 400
    ARQEAAEAAE ATLRAAITIG PEPVAAPPLI HERITP 436
    Length:436
    Mass (Da):44,550
    Last modified:February 1, 2005 - v1
    Checksum:i756D30DEEA4BC40D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000031 Genomic DNA. Translation: AAV96170.1.
    RefSeqiYP_168137.1. NC_003911.12.

    Genome annotation databases

    EnsemblBacteriaiAAV96170; AAV96170; SPO2929.
    GeneIDi3195037.
    KEGGisil:SPO2929.
    PATRICi23379287. VBIRuePom114501_2989.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000031 Genomic DNA. Translation: AAV96170.1 .
    RefSeqi YP_168137.1. NC_003911.12.

    3D structure databases

    ProteinModelPortali Q5LPB9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 246200.SPO2929.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAV96170 ; AAV96170 ; SPO2929 .
    GeneIDi 3195037.
    KEGGi sil:SPO2929.
    PATRICi 23379287. VBIRuePom114501_2989.

    Phylogenomic databases

    HOGENOMi HOG000047313.
    KOi K00758.
    OMAi IHERITP.
    OrthoDBi EOG61ZTGG.

    Family and domain databases

    Gene3Di 3.40.1030.10. 1 hit.
    3.90.1170.30. 1 hit.
    InterProi IPR000312. Glycosyl_Trfase_fam3.
    IPR017459. Glycosyl_Trfase_fam3_N_dom.
    IPR013102. PYNP_C.
    IPR018090. Pyrmidine_PPas_bac/euk.
    IPR000053. Pyrmidine_PPase.
    IPR017872. Pyrmidine_PPase_CS.
    [Graphical view ]
    PANTHERi PTHR10515. PTHR10515. 1 hit.
    Pfami PF02885. Glycos_trans_3N. 1 hit.
    PF00591. Glycos_transf_3. 1 hit.
    PF07831. PYNP_C. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000478. TP_PyNP. 1 hit.
    SMARTi SM00941. PYNP_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47648. SSF47648. 1 hit.
    SSF52418. SSF52418. 1 hit.
    SSF54680. SSF54680. 1 hit.
    TIGRFAMsi TIGR02644. Y_phosphoryl. 1 hit.
    PROSITEi PS00647. THYMID_PHOSPHORYLASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700808 / DSM 15171 / DSS-3Imported.

    Entry informationi

    Entry nameiQ5LPB9_RUEPO
    AccessioniPrimary (citable) accession number: Q5LPB9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 1, 2005
    Last sequence update: February 1, 2005
    Last modified: October 1, 2014
    This is version 62 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3