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Q5LP28 (Q5LP28_RUEPO) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:SPO3024 EMBL AAV96260.1
OrganismRuegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi) [Complete proteome] [HAMAP] EMBL AAV96260.1
Taxonomic identifier246200 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRuegeria

Protein attributes

Sequence length465 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
Q5LP28 [UniParc].

Last modified February 1, 2005. Version 1.
Checksum: 6964B207BC60278B

FASTA46551,543
        10         20         30         40         50         60 
MERRLCAILA ADMAGYSRLM ERNETDVLNR QKLYRRELID PAIAQAGGQI VKTTGDGMLA 

        70         80         90        100        110        120 
RFDTAQAALR CALEIQQAMQ QREEDTPRKE RIQYRIGINI GDIVLEDGDI FGDAVNVAAR 

       130        140        150        160        170        180 
LEAISEPGAI CVSDIVHQIT QDRVSEPFTD LGLQKVKNIT RPIRVWQWVP DADRDQSHDP 

       190        200        210        220        230        240 
QPSHVQHVSF CIAGDGTQLA WARVGKGPSV LKAPNWLNHL DYEWRSPLWG PFLEQMSQRC 

       250        260        270        280        290        300 
DLVRFDQRGN GLSDRDPHEI SEDAMISDMR SIVQAAGLDR FLLFGISQGC AFSVRYAAEN 

       310        320        330        340        350        360 
PDKVAGLILV SGYLRGSLKR GSPEQAAISE ATNVLIREGW GSPNPAYRHL FTESMMPDAT 

       370        380        390        400        410        420 
EAQKAVFDEL QRVSCSPEVA ARINTMNATV DVSGFAPRIR VPTLVLHSEG DRRVPVAEGR 

       430        440        450        460 
RMAAMIPGAR FVTLPGNNHA LIDNSPALDL FLSEFSSFLA EIVES 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment."
Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B., Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.M., Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M. expand/collapse author list , Ye W., Miller T.R., Carlton J., Rasko D.A., Paulsen I.T., Ren Q., Daugherty S.C., DeBoy R.T., Dodson R.J., Durkin A.S., Madupu R., Nelson W.C., Sullivan S.A., Rosovitz M.J., Haft D.H., Selengut J., Ward N.
Nature 432:910-913(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700808 / DSM 15171 / DSS-3.
[2]"Crystal Structure of Adenylate/Guanylate Cyclase/Hydrolase from Silicibacter pomeroyi."
Kim Y., Li H., Clancy S., Joachimiak A.
Submitted (APR-2010) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.60 ANGSTROMS) OF 2-187.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000031 Genomic DNA. Translation: AAV96260.1.
RefSeqYP_168228.1. NC_003911.12.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3MR7X-ray2.60A/B/C2-187[»]
ProteinModelPortalQ5LP28.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING246200.SPO3024.

Protocols and materials databases

DNASU3192818.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAV96260; AAV96260; SPO3024.
GeneID3192818.
KEGGsil:SPO3024.
PATRIC23379485. VBIRuePom114501_3086.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OrthoDBEOG6HTNT2.

Family and domain databases

Gene3D3.30.70.1230. 1 hit.
3.40.50.1820. 1 hit.
InterProIPR001054. A/G_cyclase.
IPR029058. AB_hydrolase.
[Graphical view]
PfamPF00211. Guanylate_cyc. 1 hit.
[Graphical view]
SMARTSM00044. CYCc. 1 hit.
[Graphical view]
SUPFAMSSF53474. SSF53474. 1 hit.
SSF55073. SSF55073. 1 hit.
PROSITEPS50125. GUANYLATE_CYCLASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

EvolutionaryTraceQ5LP28.

Entry information

Entry nameQ5LP28_RUEPO
AccessionPrimary (citable) accession number: Q5LP28
Entry history
Integrated into UniProtKB/TrEMBL: February 1, 2005
Last sequence update: February 1, 2005
Last modified: July 9, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)