Reviewed,
UniProtKB/Swiss-Prot Q5LIV6 (UXUA_BACFN)
Last modified
November 3, 2009.
Version 26.
History...
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90%,
50% identity |
Documents (2) |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Mannonate dehydratase EC=4.2.1.8 Alternative name(s): D-mannonate hydrolase | ||||
| Gene names |
| ||||
| Organism | Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 272559 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides |
Protein attributes
| Sequence length | 396 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | D-mannonate = 2-dehydro-3-deoxy-D-gluconate + H2O. HAMAP MF_00106 |
| Pathway | Carbohydrate metabolism; pentose and glucuronate interconversion. HAMAP MF_00106 |
| Sequence similarities | Belongs to the mannonate dehydratase family. |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Lyase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | glucuronate catabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | mannonate dehydratase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 396 | 396 | Mannonate dehydratase HAMAP MF_00106 | PRO_0000231051 | |||
Sequences
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References
| [1] | "Extensive DNA inversions in the B. fragilis genome control variable gene expression." Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. Parkhill J.Science 307:1463-1465(2005) [PubMed: 15746427] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| CR626927 Genomic DNA. Translation: CAH05920.1. | |
| RefSeq | YP_209882.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q5LIV6. |
Genome annotation databases | |
| GeneID | 3286900. |
| GenomeReviews | Gene locus BF0142 in contig CR626927_GR. |
| KEGG | bfs:BF0142. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | Q5LIV6. |
| OMA | VHEEIKT. |
Enzyme and pathway databases | |
| BioCyc | BFRA272559:BF0142-MON. |
Family and domain databases | |
| HAMAP | MF_00106. [Tree] |
| InterPro | IPR004628. Man_deHydtase. IPR013022. Xyl_isomerase-like_TIM-brl. [Graphical view] |
| Gene3D | G3DSA:3.20.20.150. Xyl_isomerase-like_TIM-brl. 1 hit. |
| Pfam | PF03786. UxuA. 1 hit. [Graphical view] |
| PIRSF | PIRSF016049. Man_dehyd. 1 hit. |
| TIGRFAMs | TIGR00695. uxuA. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | UXUA_BACFN | ||||||||
| Accession | Primary (citable) accession number: Q5LIV6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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