Unreviewed, UniProtKB/TrEMBL Q5LIH4 (Q5LIH4_BACFN)

Names and origin

Protein names

Submitted name:
    Putative exported protein EMBL CAH06052.1

Gene names

Ordered Locus Names:

BF0277

Organism

Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP]

Taxonomic identifier

272559 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length	358 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5LIH4-1 [UniParc]. Last modified June 21, 2005. Version 1. Checksum: 3609DCE612BB4955	FASTA	358	41,041
	10 20 30 40 50 60 MKLKHIPLLL LVLTCCPACQ NKKASATKEI PSEATYTNPL LAVGAEPWAV FHEGKYYYTQ 70 80 90 100 110 120 GAENKIILWE TNDITDLEHA ARKEVWIPKE ISNSYHLWGP EIHRIDGKWY VYFAADDGNM 130 140 150 160 170 180 DNHHIYVIEN SSPNPLEGEF VMKGRIKTDK DDNWAIHAST FEHQGQRYLI WCGWPKRRIE 190 200 210 220 230 240 TETQCIYIAR MENPWTLSSD RVMIAEPEYE WERQWISPDG SKTAYPIHVN ESPQFFESKN 250 260 270 280 290 300 KDKVLIYYCA SGSWTPYYCI GLLTADAGSD LTNAASWKKQ DTPVFEQQPE DSVFGPGSPS 310 320 330 340 350 FVPTPDEKEW YMLYHARKIP NDAPGATDSR SPRLQKISWD ANGMPVLGKP CKEGTQIK

References

[1]

"Extensive DNA inversions in the B. fragilis genome control variable gene expression." Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. , Norbertczak H., Ormond D., Price C., Rabbinowitsch E., Woodward J., Barrell B.G., Parkhill J. Science 307:1463-1465(2005) [PubMed: 15746427] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CR626927 Genomic DNA. Translation: CAH06052.1.
RefSeq	YP_210014.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q5LIH4.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Genome annotation databases
GeneID	3285876.
GenomeReviews	Gene locus BF0277 in contig CR626927_GR.
KEGG	bfs:BF0277.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q5LIH4.
OMA	EFDRIEL.
Enzyme and pathway databases
BioCyc	BFRA272559:BF0277-MON.
Family and domain databases
InterPro	IPR016828. Alpha-L-arabinofuranosidase. IPR006710. Glyco_hydro_43. [Graphical view]
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
PIRSF	PIRSF025414. Alpha-L-arabinofuranosidase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5LIH4_BACFN

Accession

Primary (citable) accession number: Q5LIH4

Entry history

Integrated into UniProtKB/TrEMBL:	June 21, 2005
Last sequence update:	June 21, 2005
Last modified:	November 3, 2009
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)