Q5LIH4 (Q5LIH4_BACFN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative exported protein EMBL CAH06052.1

Gene names

Ordered Locus Names:	BF0277
ORF Names:	BF9343_0273 EMBL CAH06052.1

Organism

Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP] EMBL CAH06052.1

Taxonomic identifier

272559 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length	358 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5LIH4 [UniParc]. Last modified June 21, 2005. Version 1. Checksum: 3609DCE612BB4955	FASTA	358	41,041
	10 20 30 40 50 60 MKLKHIPLLL LVLTCCPACQ NKKASATKEI PSEATYTNPL LAVGAEPWAV FHEGKYYYTQ 70 80 90 100 110 120 GAENKIILWE TNDITDLEHA ARKEVWIPKE ISNSYHLWGP EIHRIDGKWY VYFAADDGNM 130 140 150 160 170 180 DNHHIYVIEN SSPNPLEGEF VMKGRIKTDK DDNWAIHAST FEHQGQRYLI WCGWPKRRIE 190 200 210 220 230 240 TETQCIYIAR MENPWTLSSD RVMIAEPEYE WERQWISPDG SKTAYPIHVN ESPQFFESKN 250 260 270 280 290 300 KDKVLIYYCA SGSWTPYYCI GLLTADAGSD LTNAASWKKQ DTPVFEQQPE DSVFGPGSPS 310 320 330 340 350 FVPTPDEKEW YMLYHARKIP NDAPGATDSR SPRLQKISWD ANGMPVLGKP CKEGTQIK

References

[1]

"Extensive DNA inversions in the B. fragilis genome control variable gene expression." Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. , Norbertczak H., Ormond D., Price C., Rabbinowitsch E., Woodward J., Barrell B.G., Parkhill J. Science 307:1463-1465(2005) [PubMed: 15746427] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR626927 Genomic DNA. Translation: CAH06052.1.
RefSeq	YP_210014.1. NC_003228.3.
3D structure databases
ProteinModelPortal	Q5LIH4.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5LIH4.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3285876.
GenomeReviews	Gene locus BF0277 in contig CR626927_GR.
KEGG	bfs:BF0277.
PATRIC	21037010. VBIBacFra29119_0270.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3940.
HOGENOM	HBG348165.
OMA	IHASTFE.
ProtClustDB	CLSK823541.
Family and domain databases
InterPro	IPR016828. Alpha-L-arabinofuranosidase. IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
PIRSF	PIRSF025414. Alpha-L-arabinofuranosidase. 1 hit.
SUPFAM	SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5LIH4_BACFN

Accession

Primary (citable) accession number: Q5LIH4

Entry history

Integrated into UniProtKB/TrEMBL:	June 21, 2005
Last sequence update:	June 21, 2005
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)