Q5LIH2 (Q5LIH2_BACFN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative glycosylhydrolase EMBL CAH06054.1

Gene names

Ordered Locus Names:	BF0279
ORF Names:	BF9343_0275 EMBL CAH06054.1

Organism

Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP] EMBL CAH06054.1

Taxonomic identifier

272559 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length	388 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL CAH06054.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5LIH2 [UniParc]. Last modified June 21, 2005. Version 1. Checksum: 0BF56FD3E3F679D9	FASTA	388	45,032
	10 20 30 40 50 60 MRKSFIALTF LLVPACLSAQ LGGKIYLQRA DSLLQRVLSL YEVKKYGLLM ETYPRNPKQQ 70 80 90 100 110 120 ITYTANTGSE VTQQEVSFLW PYSAMVSGCV SLYKTSGNKK YKKLMDKQIK PGLDLYWDTT 130 140 150 160 170 180 RQPECYQSYP AFAGQNDRYY DDNDWVAIDF CDYYAVTKNK EYLKKAIALH DYIYSGWSDE 190 200 210 220 230 240 LGGGIYWCEQ KKESKNTCSN APATVLCMKL YKLTKDKKYL DQAMATYQWT RDNLRDPSDF 250 260 270 280 290 300 VYWDNKNLQG KIGYAKYTYN SGQMIQAGVL LYQATGDEQY LKDAQQTAKG SYEHFLKPQP 310 320 330 340 350 360 TVKGEMKFFP SSPWFNVILF RGLKALYKVD KNDTYVKAMI DNADYAWQYT RDENGLLNND 370 380 WSGNRKDKFK SLLENSCMIE LYSEISEL

References

[1]

"Extensive DNA inversions in the B. fragilis genome control variable gene expression." Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. , Norbertczak H., Ormond D., Price C., Rabbinowitsch E., Woodward J., Barrell B.G., Parkhill J. Science 307:1463-1465(2005) [PubMed: 15746427] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR626927 Genomic DNA. Translation: CAH06054.1.
RefSeq	YP_210016.1. NC_003228.3.
3D structure databases
ProteinModelPortal	Q5LIH2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5LIH2.
Protein family/group databases
CAZy	GH76. Glycoside Hydrolase Family 76.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3288369.
GenomeReviews	Gene locus BF0279 in contig CR626927_GR.
KEGG	bfs:BF0279.
PATRIC	21037014. VBIBacFra29119_0272.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4833.
HOGENOM	HBG034414.
OMA	ILFRGLK.
ProtClustDB	CLSK913585.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR005198. Glyco_hydro_76. IPR014512. O_gly_hdrol. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 2 hits.
Pfam	PF03663. Glyco_hydro_76. 1 hit. [Graphical view]
PIRSF	PIRSF021505. O_gly_hdrol. 1 hit.
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5LIH2_BACFN

Accession

Primary (citable) accession number: Q5LIH2

Entry history

Integrated into UniProtKB/TrEMBL:	June 21, 2005
Last sequence update:	June 21, 2005
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)