Q5LIF8 (Q5LIF8_BACFN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative exported glycosylhydrolase EMBL CAH06068.1

Gene names

Ordered Locus Names:	BF0295
ORF Names:	BF9343_0289 EMBL CAH06068.1

Organism

Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP] EMBL CAH06068.1

Taxonomic identifier

272559 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length	372 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL CAH06068.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5LIF8 [UniParc]. Last modified June 21, 2005. Version 1. Checksum: D440A6B73E6BAF99	FASTA	372	43,284
	10 20 30 40 50 60 MKNKVLIIVA ILLLLPNAMA WAHQPADGNL KHFTKKDATT AMDAFHSTFY NPDMKLYAIS 70 80 90 100 110 120 SDMKGRAAIW VQAIYWDMIM NAYKRTKAPK YRRLIEEVYQ GGYEQYDKYN WDNKIEWFIY 130 140 150 160 170 180 DDMMWWIISL ARAYEITNDP KYLAHASSGF YHVWKESYDK ERGGLWWNFK HDGKMACINY 190 200 210 220 230 240 PTTVGAMTLY NVTKDPDYLE KAKSVYAWSR DVFFDKEKGR IADNMHYHFQ RQNGMDIDWT 250 260 270 280 290 300 TQLYNQATFI GSAVMLYKAT GEKAYLDDAV LAADYVRNEM CDADGLLPFK NGVEQGIYAA 310 320 330 340 350 360 IFAQYIIRLI EDGNQPQYMD WLRHNIDVAW NNRDVNRNVT FKDAAKPCPT GVMESYDASG 370 CPALMQVISP FK

References

[1]

"Extensive DNA inversions in the B. fragilis genome control variable gene expression." Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. , Norbertczak H., Ormond D., Price C., Rabbinowitsch E., Woodward J., Barrell B.G., Parkhill J. Science 307:1463-1465(2005) [PubMed: 15746427] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR626927 Genomic DNA. Translation: CAH06068.1.
RefSeq	YP_210030.1. NC_003228.3.
3D structure databases
ProteinModelPortal	Q5LIF8.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5LIF8.
Protein family/group databases
CAZy	GH76. Glycoside Hydrolase Family 76.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3288432.
GenomeReviews	Gene locus BF0295 in contig CR626927_GR.
KEGG	bfs:BF0295.
PATRIC	21037046. VBIBacFra29119_0288.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4833.
HOGENOM	HBG034325.
OMA	NQATFIG.
ProtClustDB	CLSK260076.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR005198. Glyco_hydro_76. IPR014512. O_gly_hdrol. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit.
Pfam	PF03663. Glyco_hydro_76. 1 hit. [Graphical view]
PIRSF	PIRSF021505. O_gly_hdrol. 1 hit.
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5LIF8_BACFN

Accession

Primary (citable) accession number: Q5LIF8

Entry history

Integrated into UniProtKB/TrEMBL:	June 21, 2005
Last sequence update:	June 21, 2005
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)