Q5LIF0 (Q5LIF0_BACFN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative exported glycosylhydrolase EMBL CAH06076.1

Gene names

Ordered Locus Names:	BF0303
ORF Names:	BF9343_0297 EMBL CAH06076.1

Organism

Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP] EMBL CAH06076.1

Taxonomic identifier

272559 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length	322 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL CAH06076.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5LIF0 [UniParc]. Last modified June 21, 2005. Version 1. Checksum: DD395B913230BDAE	FASTA	322	36,876
	10 20 30 40 50 60 MGKKKISTGV WLLGLLIVFC SYTGVAGAKN RSKTKTVTKS VPLGDPFILL HDGTYYAYGT 70 80 90 100 110 120 HAADGIEVYT SKDLRKWKLH GLALHKDDVW ADSRFWAPEI YEIDGKFYMY YTADEHICVA 130 140 150 160 170 180 IADSPLGPFR QNEKKPMVAG EKMIDSSLFI DEDGKPYLFF VRFNDGNNVW VAELEDDYMT 190 200 210 220 230 240 IKTETMRPCI HVSQAWEEVW PRVNEGSYVL KHNGLYYMTY SGNSFESPFY GIGCATATDI 250 260 270 280 290 300 MGEWTKYQEN PILQKPGNLQ GVGHSAMFKD KKGRLRIVYH AHKDKEHIHP RGMYIGKVYF 310 320 EKVDGIDRMR INKEYIAAEL VE

References

[1]

"Extensive DNA inversions in the B. fragilis genome control variable gene expression." Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. , Norbertczak H., Ormond D., Price C., Rabbinowitsch E., Woodward J., Barrell B.G., Parkhill J. Science 307:1463-1465(2005) [PubMed: 15746427] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR626927 Genomic DNA. Translation: CAH06076.1.
RefSeq	YP_210038.1. NC_003228.3.
3D structure databases
ProteinModelPortal	Q5LIF0.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5LIF0.
Protein family/group databases
CAZy	GH43. Glycoside Hydrolase Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3288403.
GenomeReviews	Gene locus BF0303 in contig CR626927_GR.
KEGG	bfs:BF0303.
PATRIC	21037062. VBIBacFra29119_0296.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG151221.
HOGENOM	HBG498968.
OMA	SANDFRN.
ProtClustDB	CLSK823331.
Family and domain databases
InterPro	IPR006710. Glyco_hydro_43. IPR023296. Glyco_hydro_43_beta-prop. [Graphical view]
Gene3D	G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF04616. Glyco_hydro_43. 1 hit. [Graphical view]
SUPFAM	SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5LIF0_BACFN

Accession

Primary (citable) accession number: Q5LIF0

Entry history

Integrated into UniProtKB/TrEMBL:	June 21, 2005
Last sequence update:	June 21, 2005
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)