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Q5LI66

- Q5LI66_BACFN

UniProt

Q5LI66 - Q5LI66_BACFN

Protein

Glutamate decarboxylase

Gene

gadB

Organism
Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (21 Jun 2005)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciBFRA272559:GKF0-385-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:gadBImported
    ORF Names:BF9343_0382Imported
    OrganismiBacteroides fragilis (strain ATCC 25285 / NCTC 9343)Imported
    Taxonomic identifieri272559 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
    ProteomesiUP000006731: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi272559.BF0393.

    Structurei

    3D structure databases

    ProteinModelPortaliQ5LI66.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0076.
    HOGENOMiHOG000022741.
    KOiK01580.
    OMAiKIHERTR.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q5LI66-1 [UniParc]FASTAAdd to Basket

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    MEDLNFRKGD AKTEAFGSNR MLQPSPVEKI PDGPTTPEIA YQMVKDETFA    50
    QTQPRLNLAT FVTTYMDDYA TKLMNEAINI NYIDETEYPR IAVMNGKCIN 100
    IVANLWNSPE KDTWKTGALA IGSSEACMLG GVAAWLRWRK KRQAQGKPFD 150
    KPNFVISTGF QVVWEKFAQL WQIEMRQVPL TLDKTTLDPE EALKMCDENT 200
    ICVVPIQGVT WTGLNDDVEA LDKALDAYNA KTGYDIPIHV DAASGGFILP 250
    FLYPDTKWDF RLKWVLSISV SGHKFGLVYP GLGWVVWKGK EYLPEEMAFS 300
    VNYLGANITQ VGLNFSRPAA QILGQYYQFI RLGFQGYKEV QYNSLQIAKY 350
    IHSQIAKMTP FVNYSEDVVN PLFIWYMKPE YAKNAKWTLY DLQDKLAQHG 400
    WMVPAYTLPA KLQDYVVMRV VVRQGFSRDM ADMLLGDIKN AIAELEKLEY 450
    PTSTRIAQEK NLPVEAKVFN HTGKPQAAKK 480
    Length:480
    Mass (Da):54,594
    Last modified:June 21, 2005 - v1
    Checksum:i2D028490E1BA5B09
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR626927 Genomic DNA. Translation: CAH06161.1.
    RefSeqiYP_210122.1. NC_003228.3.

    Genome annotation databases

    EnsemblBacteriaiCAH06161; CAH06161; BF9343_0382.
    GeneIDi3286698.
    KEGGibfs:BF0393.
    PATRICi21037248. VBIBacFra29119_0388.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR626927 Genomic DNA. Translation: CAH06161.1 .
    RefSeqi YP_210122.1. NC_003228.3.

    3D structure databases

    ProteinModelPortali Q5LI66.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272559.BF0393.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAH06161 ; CAH06161 ; BF9343_0382 .
    GeneIDi 3286698.
    KEGGi bfs:BF0393.
    PATRICi 21037248. VBIBacFra29119_0388.

    Phylogenomic databases

    eggNOGi COG0076.
    HOGENOMi HOG000022741.
    KOi K01580.
    OMAi KIHERTR.
    OrthoDBi EOG6TFCPW.

    Enzyme and pathway databases

    BioCyci BFRA272559:GKF0-385-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 25285 / NCTC 9343Imported.

    Entry informationi

    Entry nameiQ5LI66_BACFN
    AccessioniPrimary (citable) accession number: Q5LI66
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 21, 2005
    Last sequence update: June 21, 2005
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3