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Q5LI66

- Q5LI66_BACFN

UniProt

Q5LI66 - Q5LI66_BACFN

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Protein
Submitted name:

Putative glutamate decarboxylase

Gene
gadB, BF9343_0382
Organism
Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBFRA272559:GKF0-385-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative glutamate decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Name:gadBImported
ORF Names:BF9343_0382Imported
OrganismiBacteroides fragilis (strain ATCC 25285 / NCTC 9343)Imported
Taxonomic identifieri272559 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000006731: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi272559.BF0393.

Structurei

3D structure databases

ProteinModelPortaliQ5LI66.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000022741.
KOiK01580.
OMAiKIHERTR.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q5LI66-1 [UniParc]FASTAAdd to Basket

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MEDLNFRKGD AKTEAFGSNR MLQPSPVEKI PDGPTTPEIA YQMVKDETFA    50
QTQPRLNLAT FVTTYMDDYA TKLMNEAINI NYIDETEYPR IAVMNGKCIN 100
IVANLWNSPE KDTWKTGALA IGSSEACMLG GVAAWLRWRK KRQAQGKPFD 150
KPNFVISTGF QVVWEKFAQL WQIEMRQVPL TLDKTTLDPE EALKMCDENT 200
ICVVPIQGVT WTGLNDDVEA LDKALDAYNA KTGYDIPIHV DAASGGFILP 250
FLYPDTKWDF RLKWVLSISV SGHKFGLVYP GLGWVVWKGK EYLPEEMAFS 300
VNYLGANITQ VGLNFSRPAA QILGQYYQFI RLGFQGYKEV QYNSLQIAKY 350
IHSQIAKMTP FVNYSEDVVN PLFIWYMKPE YAKNAKWTLY DLQDKLAQHG 400
WMVPAYTLPA KLQDYVVMRV VVRQGFSRDM ADMLLGDIKN AIAELEKLEY 450
PTSTRIAQEK NLPVEAKVFN HTGKPQAAKK 480
Length:480
Mass (Da):54,594
Last modified:June 21, 2005 - v1
Checksum:i2D028490E1BA5B09
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR626927 Genomic DNA. Translation: CAH06161.1.
RefSeqiYP_210122.1. NC_003228.3.

Genome annotation databases

EnsemblBacteriaiCAH06161; CAH06161; BF9343_0382.
GeneIDi3286698.
KEGGibfs:BF0393.
PATRICi21037248. VBIBacFra29119_0388.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR626927 Genomic DNA. Translation: CAH06161.1 .
RefSeqi YP_210122.1. NC_003228.3.

3D structure databases

ProteinModelPortali Q5LI66.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 272559.BF0393.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAH06161 ; CAH06161 ; BF9343_0382 .
GeneIDi 3286698.
KEGGi bfs:BF0393.
PATRICi 21037248. VBIBacFra29119_0388.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000022741.
KOi K01580.
OMAi KIHERTR.
OrthoDBi EOG6TFCPW.

Enzyme and pathway databases

BioCyci BFRA272559:GKF0-385-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25285 / NCTC 9343.

Entry informationi

Entry nameiQ5LI66_BACFN
AccessioniPrimary (citable) accession number: Q5LI66
Entry historyi
Integrated into UniProtKB/TrEMBL: June 21, 2005
Last sequence update: June 21, 2005
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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