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Q5LHX6 (Q5LHX6_BACFN) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative melibiase EMBL CAH06254.1
Gene names
Ordered Locus Names:BF0498
ORF Names:BF9343_0475 EMBL CAH06254.1
OrganismBacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP] EMBL CAH06254.1
Taxonomic identifier272559 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length722 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-galactosidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q5LHX6 [UniParc].

Last modified June 21, 2005. Version 1.
Checksum: 354878D53FE149F0

FASTA72282,252
        10         20         30         40         50         60 
MLKRTFILIG LVLSFCSLPA QELIQITTRN TALVFRVANQ SLRQVYYGPR LADTDVLQKQ 

        70         80         90        100        110        120 
GNNFPAYSTY GMGEQNEVAL HAVHADGNTS TLLNFENVKQ ESPEPGITLT TISLKDPLYP 

       130        140        150        160        170        180 
FQVKLFYKAY EESDLIEQWT IYQHTEKKPV TLYQFASAQL SFKSSSYRLT HFAGDWAGEC 

       190        200        210        220        230        240 
NMSEVELTEG IKVIDSKLGT RATFFAHPMC LLSLNGRMTE DNGEVIGMAL AWPANFKLEF 

       250        260        270        280        290        300 
EKNNNQELRV LAGMNPYASH YKLKKGDVFQ TPSFLYTYST KGNGQVSRNF HRWARKYGLR 

       310        320        330        340        350        360 
HGENSRYTLM NNWEATYFNF NEPKLKSIIE DAAGMGFELF LLDDGWFGQK HPRNNDDAGL 

       370        380        390        400        410        420 
GDWVVNKEKL PNGLGWLVKQ CTDNDIKFGI WVEPEMVNPQ SELFEKHPDW VIQQPEREHI 

       430        440        450        460        470        480 
LFRRQLVLDL SNPEVQEFVY KSVHDILKDN PQIAFVKWDC NRAVTNPGST YLPADEQSHI 

       490        500        510        520        530        540 
WIEYGRGLLN VFKKVRDSHP DVHFMLCSGG GGRLDYGSLR YFEEYWPSDN TDALQRILIQ 

       550        560        570        580        590        600 
WGNSQFFPSI AMCCHVSASP NHQTGRTTPL KFRFDVAMQG ALGMDLQPST MNEKEVIFAK 

       610        620        630        640        650        660 
EAIKTYESIR NIVFTGDLYR ILSPYEGNRT SMMYVLPDKS RAVFYAYQLK SHIGEVSAPM 

       670        680        690        700        710        720 
RFKGLIPDKK YNVKELNIYP GSRAATGSAN GQSFSGDFLM NQGLPIGLSG DYSSAVIELE 


QQ

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References

[1]"Extensive DNA inversions in the B. fragilis genome control variable gene expression."
Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. expand/collapse author list , Norbertczak H., Ormond D., Price C., Rabbinowitsch E., Woodward J., Barrell B.G., Parkhill J.
Science 307:1463-1465(2005) [PubMed: 15746427] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CR626927 Genomic DNA. Translation: CAH06254.1.
RefSeqYP_210212.1. NC_003228.3.

3D structure databases

ProteinModelPortalQ5LHX6.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5LHX6.

Protein family/group databases

CAZyGH36. Glycoside Hydrolase Family 36.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3288439.
GenomeReviewsGene locus BF0498 in contig CR626927_GR.
KEGGbfs:BF0498.
PATRIC21037452. VBIBacFra29119_0486.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3345.
HOGENOMHBG302872.
OMAKASFAFY.
ProtClustDBCLSK823323.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002252. Glyco_hydro_36.
IPR000111. Glyco_hydro_GHD.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK07407.
PfamPF02065. Melibiase. 1 hit.
[Graphical view]
PIRSFPIRSF005536. Agal. 1 hit.
PRINTSPR00743. GLHYDRLASE36.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00512. ALPHA_GALACTOSIDASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5LHX6_BACFN
AccessionPrimary (citable) accession number: Q5LHX6
Entry history
Integrated into UniProtKB/TrEMBL: June 21, 2005
Last sequence update: June 21, 2005
Last modified: December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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