Q5LEF6 (Q5LEF6_BACFN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alpha-L-fucosidase EMBL CAH07495.1

Gene names

Ordered Locus Names:	BF1796
ORF Names:	BF9343_1714 EMBL CAH07495.1

Organism

Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP] EMBL CAH07495.1

Taxonomic identifier

272559 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	fucose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-L-fucosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q5LEF6 [UniParc]. Last modified June 21, 2005. Version 1. Checksum: 9966302B8C75FE2E	FASTA	420	48,932
	10 20 30 40 50 60 MKKYCLLLFC LICIPLMGQS TYKPDWESID KRPVPAWFEN AKFGIFIHWG LYSVPAWSPK 70 80 90 100 110 120 GTYSEWYKYW LDKKTLMGNG NFTGTEIYDY HRKMYGEDFT YADFAPMFKA LSYDPEEWAD 130 140 150 160 170 180 LFEHSGAKYV VLTTKHHDGF ALWPSREASI SYGRPWNSME IGAHRDLVGE YVNALRKTDI 190 200 210 220 230 240 KVGCYFSLRE WDNPLYNKET MDLFYERHWF PQLQDLVNRY KPDLIWADGP DQINDKQWQA 250 260 270 280 290 300 ERTLAWLYSE SPVKDSIVVN DRWANNTGKK HGDYYTREYS NTNSSYNKPW EECRGIGLSF 310 320 330 340 350 360 GYNQNEDLGD YTSPKALILT LVNIVSQGGN LLLDIGPNAN GKIPPIMQER LLHIGQWLKV 370 380 390 400 410 420 NGEAIYGTRA WVNSCQWSKG NREWKSKEKH YVSGDAILKQ TVDPDPGYAV KEVFFTKKLV

References

[1]

"Extensive DNA inversions in the B. fragilis genome control variable gene expression." Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. , Norbertczak H., Ormond D., Price C., Rabbinowitsch E., Woodward J., Barrell B.G., Parkhill J. Science 307:1463-1465(2005) [PubMed: 15746427] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR626927 Genomic DNA. Translation: CAH07495.1.
RefSeq	YP_211432.1. NC_003228.3.
3D structure databases
ProteinModelPortal	Q5LEF6.
ModBase	Search...
Protein-protein interaction databases
STRING	Q5LEF6.
Protein family/group databases
CAZy	GH29. Glycoside Hydrolase Family 29.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3285758.
GenomeReviews	Gene locus BF1796 in contig CR626927_GR.
KEGG	bfs:BF1796.
PATRIC	21040044. VBIBacFra29119_1768.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3669.
HOGENOM	HBG515484.
OMA	FENAKFG.
ProtClustDB	CLSK833895.
Family and domain databases
InterPro	IPR000933. Glyco_hydro_29. IPR016286. Glyco_hydro_29_sub. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01206.
PANTHER	PTHR10030. Glyco_hydro_29. 1 hit.
Pfam	PF01120. Alpha_L_fucos. 1 hit. [Graphical view]
PIRSF	PIRSF001092. Alpha-L-fucosidase. 1 hit.
PRINTS	PR00741. GLHYDRLASE29.
SMART	SM00812. Alpha_L_fucos. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q5LEF6_BACFN

Accession

Primary (citable) accession number: Q5LEF6

Entry history

Integrated into UniProtKB/TrEMBL:	June 21, 2005
Last sequence update:	June 21, 2005
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)