Putative exported protein - Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)

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Q5LCY3 (Q5LCY3_BACFN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 44. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Putative exported protein EMBL CAH08030.1

Gene names

Ordered Locus Names:	BF2334
ORF Names:	BF9343_2249 EMBL CAH08030.1

Organism

Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP] EMBL CAH08030.1

Taxonomic identifier

Taxonomic lineage

Bacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides ›

Protein attributes

Sequence length	245 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 4I17 Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence

Length

Mass (Da)

Tools

Q5LCY3 [UniParc].

Last modified June 21, 2005. Version 1.
Checksum: 35DE858CD45DE679
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245

27,457

        10         20         30         40         50         60 
MKKIILLLAL CFTANNFFAQ TTDPNQLKNE GNDALNAKNY AVAFEKYSEY LKLTNNQDSV 

        70         80         90        100        110        120 
TAYNCGVCAD NIKKYKEAAD YFDIAIKKNY NLANAYIGKS AAYRDMKNNQ EYIATLTEGI 

       130        140        150        160        170        180 
KAVPGNATIE KLYAIYYLKE GQKFQQAGNI EKAEENYKHA TDVTSKKWKT DALYSLGVLF 

       190        200        210        220        230        240 
YNNGADVLRK ATPLASSNKE KYASEKAKAD AAFKKAVDYL GEAVTLSPNR TEIKQMQDQV 


KAMIK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Extensive DNA inversions in the B. fragilis genome control variable gene expression." Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. Parkhill J. Science 307:1463-1465(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25285 / NCTC 9343.
[2]	"Crystal structure of a hypothetical protein (BF2334) from Bacteroides fragilis NCTC 9343 at 1.50 A resolution." JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) Submitted (NOV-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.83 ANGSTROMS) OF 19-245.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CR626927 Genomic DNA. Translation: CAH08030.1.

RefSeq

YP_211956.1. NC_003228.3.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4I17	X-ray	1.83	A	19-245	[»]

ProteinModelPortal

ModBase

Protein-protein interaction databases

STRING

Protocols and materials databases

DNASU

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

CAH08030; CAH08030; BF9343_2249.

GeneID

KEGG

PATRIC

21041190. VBIBacFra29119_2336.

Organism-specific databases

CMR

Phylogenomic databases

eggNOG

HOGENOM

KO

OMA

ProtClustDB

Family and domain databases

Gene3D

1.25.40.10. 1 hit.

InterPro

IPR001440. TPR-1.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical.
[Graphical view]

Pfam

PF00515. TPR_1. 1 hit.
[Graphical view]

PROSITE

PS50293. TPR_REGION. 1 hit.
[Graphical view]

ProtoNet

Entry information

Entry name

Q5LCY3_BACFN

Accession

Primary (citable) accession number: Q5LCY3

Entry history

Integrated into UniProtKB/TrEMBL:	June 21, 2005
Last sequence update:	June 21, 2005
Last modified:	May 1, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info