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Q5LCH9 (Q5LCH9_BACFN) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative dihydrodipicolinate synthase EMBL CAH08186.1
EC=4.2.1.52 EMBL CAH08186.1
Gene names
Name:dapA2 EMBL CAH08186.1
Ordered Locus Names:BF2486
ORF Names:BF9343_2405 EMBL CAH08186.1
OrganismBacteroides fragilis (strain ATCC 25285 / NCTC 9343) [Complete proteome] [HAMAP] EMBL CAH08186.1
Taxonomic identifier272559 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides

Protein attributes

Sequence length297 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263

Pathway

Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263

Subunit structure

Homotetramer By similarity. SAAS SAAS005263

Subcellular location

Cytoplasm By similarity SAAS SAAS005263.

Sequences

Sequence LengthMass (Da)Tools
Q5LCH9 [UniParc].

Last modified June 21, 2005. Version 1.
Checksum: 75F2B3447B44CEB4

FASTA29732,751
        10         20         30         40         50         60 
MIQTRLKGMG VALITPFKED ESVDYDALMR LVDYLLQNNA DFLCVLGTTA ETPTLSEEEK 

        70         80         90        100        110        120 
KKIKKMVIDR VNGRIPILLG VGSNNTRAVV ETLKNDDFTG VDAILSVVPY YNKPSQEGIY 

       130        140        150        160        170        180 
QHYKAIASAT ELPIVLYNVP GRTGVNMTAE TTLRIAKDFQ NVIAIKEASG NITQMDDIIK 

       190        200        210        220        230        240 
NKPANFDVIS GDDGITFPLI TLGAVGVISV IGNAFPREFS RMTRLALQGD FANALTIHHK 

       250        260        270        280        290 
FTELFNLLFV DGNPAGVKSM LNAMGMIENK LRLPLVPTRI TTFEAIRKVL NELNIKC

« Hide

References

[1]"Extensive DNA inversions in the B. fragilis genome control variable gene expression."
Cerdeno-Tarraga A.-M., Patrick S., Crossman L.C., Blakely G., Abratt V., Lennard N., Poxton I., Duerden B., Harris B., Quail M.A., Barron A., Clark L., Corton C., Doggett J., Holden M.T.G., Larke N., Line A., Lord A. expand/collapse author list , Norbertczak H., Ormond D., Price C., Rabbinowitsch E., Woodward J., Barrell B.G., Parkhill J.
Science 307:1463-1465(2005) [PubMed: 15746427] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CR626927 Genomic DNA. Translation: CAH08186.1.
RefSeqYP_212110.1. NC_003228.3.

3D structure databases

ProteinModelPortalQ5LCH9.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ5LCH9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3285189.
GenomeReviewsGene locus BF2486 in contig CR626927_GR.
KEGGbfs:BF2486.
PATRIC21041510. VBIBacFra29119_2492.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0329.
HOGENOMHBG358848.
OMAFMLCGGH.
ProtClustDBPRK03170.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002220. Dihydrodipicolinate_synth-like.
IPR020625. Dihydrodipicolinate_synth_AS.
IPR005263. Dihydrodipicolinate_synth_DapA.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01714.
PANTHERPTHR12128. DHDPS. 1 hit.
PfamPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFPIRSF001365. DHDPS. 1 hit.
PRINTSPR00146. DHPICSNTHASE.
TIGRFAMsTIGR00674. DapA. 1 hit.
PROSITEPS00666. DHDPS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ5LCH9_BACFN
AccessionPrimary (citable) accession number: Q5LCH9
Entry history
Integrated into UniProtKB/TrEMBL: June 21, 2005
Last sequence update: June 21, 2005
Last modified: December 14, 2011
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info